RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ZNF679Q8IYX0 411 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 BEST3Q8N1M1 668 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 SAMD12Q8N8I0 201 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC39A7Q92504 469 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 ZCCHC4Q9H5U6 513 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 LINC00854A0A1B0GVQ3 168 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 AQP7P3A6NL99 342 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 CENPBD1B2RD01 187 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 H3BSH0 61 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC19A2O60779 497 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 KHDRBS3O75525 346 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 PNPP00491 289 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 F10P00742 488 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 CAMK2DQ13557 499 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 IL18Q14116 193 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 TMEM225Q6GV28 225 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 DNM1P34Q6PK57 102 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 CADM3Q8N126 398 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 DTX3Q8N9I9 347 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 OR51A4Q8NGJ6 313 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 OR5H6Q8NGV6 325 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 TRMT10AQ8TBZ6 339 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 HAVCR2Q8TDQ0 301 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 PPP1R14AQ96A00 147 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 C4orf45Q96LM5 186 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 ITGB1BP2Q9UKP3 347 aa15.2■□□□□ 0.02
SHKBP1-216ENST00000598201 DOCK10Q96BY6 2186 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 TRBV5-5A0A0J9YX44 114 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 A0A1B0GVC2 190 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 A6NIN4 97 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 CBR3O75828 277 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 P04436 131 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 FKBP2P26885 142 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 SOX2P48431 317 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF239Q16600 458 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 Q499Y3 187 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 AGAP7PQ5VUJ5 663 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 OR7E24Q6IFN5 339 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 IGF2-ASQ6U949 168 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 LINC00346Q8IVM7 164 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 RNF128Q8TEB7 428 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 THOC3Q96J01 351 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 OXGR1Q96P68 337 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 GPR87Q9BY21 358 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 MFRPQ9BY79 579 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 B3GNT4Q9C0J1 378 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 CYSLTR2Q9NS75 346 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 EXTL2Q9UBQ6 330 aa15.19■□□□□ 0.02
SHKBP1-216ENST00000598201 C21orf140B9A014 251 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 RAD1O60671 282 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 PGA4P0DJD7 388 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 PGA3P0DJD8 388 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SNRPBP14678 240 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF823P16415 610 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF24P17028 368 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC35A1P78382 337 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 MFGE8Q08431 387 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 PCK2Q16822 640 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 FDX2Q6P4F2 183 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 CCBE1Q6UXH8 406 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 KRT77Q7Z794 578 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF554Q86TJ5 538 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF676Q8N7Q3 588 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 OR52N5Q8NH56 324 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 NEURL2Q9BR09 285 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SACM1LQ9NTJ5 587 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 DEPPQ9NTK1 212 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ADAM30Q9UKF2 790 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC22A13Q9Y226 551 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 CNTRLQ7Z7A1 2325 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 TMEM212A6NML5 194 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 HSPB2A8KAH6 182 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 PMS2P2O95744 297 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 RFX2P48378 723 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 CD97P48960 835 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 GPR85P60893 370 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 H3F3AP84243 136 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 HSPB2Q16082 182 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 TEX30Q5JUR7 227 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 CARD17Q5XLA6 110 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 NRARPQ7Z6K4 114 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 LRRC28Q86X40 367 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF454Q8N9F8 522 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 OR4M1Q8NGD0 313 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SETD6Q8TBK2 473 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ST7LQ8TDW4 575 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC25A44Q96H78 314 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 ASCL3Q9NQ33 180 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 LRP12Q9Y561 859 aa15.18■□□□□ 0.02
SHKBP1-216ENST00000598201 A0A0G2JMP0 313 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 A0A0X1KG70 313 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 LRRC3CA6NJW4 275 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 CDRT15L2A8MXV6 281 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms