RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MOKQ9UQ07 419 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 COA3Q9Y2R0 106 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 ATP23Q9Y6H3 246 aa17.1■□□□□ 0.33
SHKBP1-214ENST00000597396 F8P00451 2351 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 ATP6V1G2-DDX39BF2Z307 99 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 IFNGP01579 166 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 RAF1P04049 648 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 LAP3P28838 519 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 RAB39AQ14964 217 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 PGGHGQ32M88 737 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 FAM27BQ5VT28 67 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 MYPOPQ86VE0 399 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 LILRB1Q8NHL6 650 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 TSSK2Q96PF2 358 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 FN3KQ9H479 309 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 SRA1Q9HD15 236 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 POLE4Q9NR33 117 aa17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 CISD1Q9NZ45 108 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-214ENST00000597396 OR6C68A6NDL8 312 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 H3BNX3 289 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 CST2P09228 141 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 GRK5P34947 590 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 DAPP51397 102 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 HSF2Q03933 536 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 PLP2Q04941 152 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC27A4Q6P1M0 643 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 FAHD1Q6P587 224 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 GLB1L2Q8IW92 636 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 IQCF1Q8N6M8 205 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF611Q8N823 705 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 CYB561A3Q8NBI2 242 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 NPEPL1Q8NDH3 523 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 IL17RDQ8NFM7 739 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 MS4A3Q96HJ5 214 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 PKP2Q99959 881 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 GABARAPL1Q9H0R8 117 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 EMC7Q9NPA0 242 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 B9D1Q9UPM9 204 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 FKBP7Q9Y680 259 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 RTTNQ86VV8 2226 aa17.08■□□□□ 0.32
SHKBP1-214ENST00000597396 IQCMA0A1B0GVH7 501 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 SAC3D1A6NKF1 404 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 RIIAD1A6NNX1 92 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 DCTN6O00399 190 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF14P17017 642 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF3P17036 446 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF32P17041 273 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 PCBD1P61457 104 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 GINS1Q14691 196 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC37A3Q8NCC5 494 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 NINJ1Q92982 152 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 STMN2Q93045 179 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF75AQ96N20 296 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 CCL19Q99731 98 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF416Q9BWM5 594 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 RACGAP1Q9H0H5 632 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 S100A14Q9HCY8 104 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 KRT84Q9NSB2 600 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 OAZ3Q9UMX2 235 aa17.07■□□□□ 0.32
SHKBP1-214ENST00000597396 IGLV1-36A0A0B4J1U3 117 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 IGHV2OR16-5A0A0B4J2B6 119 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 C12orf71A8MTZ7 269 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 E7EQL1 145 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 ATE1O95260 518 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 PTHP01270 115 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 SERPINA5P05154 406 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 MMP7P09237 267 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 CALCRP30988 508 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 CRMP1Q14194 572 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 B3GLCTQ6Y288 498 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 OR6V1Q8N148 313 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 FBXO17Q96EF6 278 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 TEX12Q9BXU0 123 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 C1orf198Q9H425 327 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 CMC2Q9NRP2 79 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 POLR1DQ9Y2S0 133 aa17.06■□□□□ 0.32
SHKBP1-214ENST00000597396 HLA-DQA2P01906 255 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 SCG5P05408 212 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 CRISP1P54107 249 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 GLO1Q04760 184 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 ENDOGQ14249 297 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 PABPC1L2AQ5JQF8 200 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 ACSM5Q6NUN0 579 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 UGT2A3Q6UWM9 527 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 ZBTB46Q86UZ6 589 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 PARP8Q8N3A8 854 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 PROKR2Q8NFJ6 384 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 OR10H5Q8NGA6 315 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 OR4F15Q8NGB8 312 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 OR9Q1Q8NGQ5 310 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 OR2T4Q8NH00 348 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 SMAP2Q8WU79 429 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 C11orf40Q8WZ69 217 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 DHRS9Q9BPW9 319 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 WACQ9BTA9 647 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 FAIMQ9NVQ4 179 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 ENOPH1Q9UHY7 261 aa17.05■□□□□ 0.32
SHKBP1-214ENST00000597396 TIMM10BQ9Y5J6 103 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms