RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 PRR32B1ATL7 298 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 GPR171O14626 319 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 PHYHO14832 338 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 MAGEB4O15481 346 aaPredicted RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 ZNHIT1O43257 154 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 HLA-DPB1P04440 258 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 LAP3P28838 519 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 ENTPD1P49961 510 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 ZNF133P52736 654 aaPredicted RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 ADAM8P78325 824 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 LINC00303Q3SY05 128 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 AAED1Q7RTV5 226 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 OTOSQ8NHW6 89 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 TBC1D15Q8TC07 691 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 TMEM45BQ96B21 275 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 SARAFQ96BY9 339 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 INTS12Q96CB8 462 aaKnown RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 TM9SF2Q99805 663 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 COQ7Q99807 217 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 TMED9Q9BVK6 235 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 TXNL4BQ9NX01 149 aaKnown RBP13.44□□□□□ -0.26
VRK3-207ENST00000594092 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 BSNQ9UPA5 3926 aa13.44□□□□□ -0.26
VRK3-207ENST00000594092 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 SLC43A1O75387 559 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 CRYABP02511 175 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 HRGP04196 525 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 CD53P19397 219 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ALOX5APP20292 161 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 RNPS1Q15287 305 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 C10orf128Q5T292 105 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 PLEKHG7Q6ZR37 379 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 C11orf40Q8WZ69 217 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 BCO1Q9HAY6 547 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 CCDC59Q9P031 241 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 EMC3Q9P0I2 261 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 GSTK1Q9Y2Q3 226 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ZNF175Q9Y473 711 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 TRDV1A0A1B0GX56 115 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 A0A1W2PPL8 197 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 E9PI62 339 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 LRRTM2O43300 516 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 PLPP2O43688 288 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 TGM6O95932 706 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 SPARCP09486 303 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ZNF823P16415 610 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 FABP5Q01469 135 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ROR2Q01974 943 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 TRAM1Q15629 374 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 PCK2Q16822 640 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ZNF684Q5T5D7 378 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 C22orf42Q6IC83 251 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ARL9Q6T311 187 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 KCTD20Q7Z5Y7 419 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 ADGRE4PQ86SQ3 457 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 EGFL6Q8IUX8 553 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 TUSC5Q8IXB3 177 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 PELI1Q96FA3 418 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 SLIRPQ9GZT3 109 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 RNF122Q9H9V4 155 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 CLEC4AQ9UMR7 237 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 NOSIPQ9Y314 301 aaKnown RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 UGT2A1Q9Y4X1 527 aa13.43□□□□□ -0.26
VRK3-207ENST00000594092 SIRT4Q9Y6E7 314 aaPredicted RBP13.43□□□□□ -0.26
VRK3-207ENST00000594092 PIEZO2Q9H5I5 2752 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 SLC22A20A6NK97 555 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 ZNF724A8MTY0 619 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 UPK3AO75631 287 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 TACSTD2P09758 323 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 GALP22466 123 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 FGF9P31371 208 aaPredicted RBP13.42□□□□□ -0.26
VRK3-207ENST00000594092 CDAP32320 146 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 SOX6P35712 828 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 EGR3Q06889 387 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 TEX30Q5JUR7 227 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 Q8NA96 180 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 THEM6Q8WUY1 208 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 KCTD7Q96MP8 289 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 AMELYQ99218 206 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 ULBP2Q9BZM5 246 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 SEC61A2Q9H9S3 476 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 ACOXLQ9NUZ1 547 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 CLCF1Q9UBD9 225 aa13.42□□□□□ -0.26
VRK3-207ENST00000594092 PSMD9O00233 223 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 DHHO43323 396 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 RGS9O75916 674 aaPredicted RBP13.41□□□□□ -0.26
VRK3-207ENST00000594092 KRT8P05787 483 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 YES1P07947 543 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 SIRPAP78324 504 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 DYNC1I2Q13409 638 aaKnown RBP13.41□□□□□ -0.26
VRK3-207ENST00000594092 ZNF404Q494X3 552 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 CCDC58Q4VC31 144 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 DMKNQ6E0U4 476 aaPredicted RBP13.41□□□□□ -0.26
VRK3-207ENST00000594092 SLC18B1Q6NT16 456 aa13.41□□□□□ -0.26
VRK3-207ENST00000594092 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms