RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GDPD3Q7L5L3 318 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 ALG12Q9BV10 488 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 DEFB127Q9H1M4 99 aa11.78□□□□□ -0.52
VRK3-205ENST00000593919 VSX1Q9NZR4 365 aaPredicted RBP11.78□□□□□ -0.52
VRK3-205ENST00000593919 LOC102725191A0A1B0GVB3 256 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 SLC22A23A1A5C7 686 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.53
VRK3-205ENST00000593919 CXCL13O43927 109 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 GLCEO94923 617 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 APOA1P02647 267 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 ZNF24P17028 368 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 AGFG1P52594 562 aaKnown RBP11.77□□□□□ -0.53
VRK3-205ENST00000593919 HCCSP53701 268 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 SLC3A1Q07837 685 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 POU4F2Q12837 409 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 GGTLC2Q14390 218 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 CARTPTQ16568 116 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 BAK1Q16611 211 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 LCN1P1Q5VSP4 162 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 ASB18Q6ZVZ8 466 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 RFLNBQ8N5W9 214 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 NAA11Q9BSU3 229 aaPredicted RBP11.77□□□□□ -0.53
VRK3-205ENST00000593919 TBC1D24Q9ULP9 559 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 RASD1Q9Y272 281 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 RAXQ9Y2V3 346 aa11.77□□□□□ -0.53
VRK3-205ENST00000593919 GTF3C1Q12789 2109 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 A6NIZ1 184 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 K7EM74 188 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TFECO14948 347 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 ZNF708P17019 499 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 NAA10P41227 235 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 OR12D2P58182 307 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 RAP1BP61224 184 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 RAP1AP62834 184 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 SRYQ05066 204 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 EEF1A1P5Q5VTE0 462 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 FAM205BPQ63HN1 556 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 CCBE1Q6UXH8 406 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 RPTNQ6XPR3 784 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 SPATC1Q76KD6 591 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 HPS1Q92902 700 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 ZNF845Q96IR2 970 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 ATF6BQ99941 703 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 LDAHQ9H6V9 325 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TMEM165Q9HC07 324 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 MOKQ9UQ07 419 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 MKRN2OSH3BPM6 223 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 SLC16A7O60669 478 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 HPGDSO60760 199 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TMCC2O75069 709 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 VAMP5O95183 116 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TFP02787 698 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 IL7P13232 177 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 CTLA4P16410 223 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 PPP3R1P63098 170 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 ACTC1P68032 377 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 ACTA1P68133 377 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 GPR50Q13585 617 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 SLC17A1Q14916 467 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 ZNF169Q14929 603 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 TAB1Q15750 504 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 VASH1Q7L8A9 365 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 POMGNT2Q8NAT1 580 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 FAM122AQ96E09 287 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TSPAN10Q9H1Z9 355 aaPredicted RBP11.76□□□□□ -0.53
VRK3-205ENST00000593919 GRIP1Q9Y3R0 1128 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 FKBP7Q9Y680 259 aa11.76□□□□□ -0.53
VRK3-205ENST00000593919 TLN1Q9Y490 2541 aaKnown RBP11.75□□□□□ -0.53
VRK3-205ENST00000593919 FREM1Q5H8C1 2179 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 TRGV5A0A0B4J1U4 118 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 A0A1W2PQ09 198 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
VRK3-205ENST00000593919 SELENOFO60613 162 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 FMODQ06828 376 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 POU4F3Q15319 338 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 ETFDHQ16134 617 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 TP53I3Q53FA7 332 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 PDSS1Q5T2R2 415 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 LRRC69Q6ZNQ3 347 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 CELF2-AS1Q8N7Q2 184 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 OR9K2Q8NGE7 335 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 ROBO4Q8WZ75 1007 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
VRK3-205ENST00000593919 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 EXO5Q9H790 373 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 MALT1Q9UDY8 824 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms