RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
PNKP-202ENST00000593706 BCL2L14Q9BZR8 327 aa12.57□□□□□ -0.4
PNKP-202ENST00000593706 LRMDAQ9H2I8 198 aa12.57□□□□□ -0.4
PNKP-202ENST00000593706 SAP30LQ9HAJ7 183 aa12.57□□□□□ -0.4
PNKP-202ENST00000593706 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
PNKP-202ENST00000593706 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 GMNCA6NCL1 334 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 OR7A10O76100 309 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 SNAP29O95721 258 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 IGHG1P01857 330 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 HIST1H2ABP04908 130 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 QDPRP09417 244 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 PGA4P0DJD7 388 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 PGA3P0DJD8 388 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 APLNRP35414 380 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 LIMS1P48059 325 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 ERVS71-1P61550 626 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 HSF2Q03933 536 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 RPL18Q07020 188 aaKnown RBP12.56□□□□□ -0.4
PNKP-202ENST00000593706 TSTQ16762 297 aaKnown RBP12.56□□□□□ -0.4
PNKP-202ENST00000593706 DCAF12L2Q5VW00 463 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 C1orf229Q6ZS94 237 aaPredicted RBP12.56□□□□□ -0.4
PNKP-202ENST00000593706 USP51Q70EK9 711 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
PNKP-202ENST00000593706 HIST3H2AQ7L7L0 130 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 OFCC1Q8IZS5 231 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 SGMS2Q8NHU3 365 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 HIST1H2ACQ93077 130 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 CMTM5Q96DZ9 223 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 TPD52L3Q96J77 140 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 SLC6A7Q99884 636 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
PNKP-202ENST00000593706 TRRAPQ9Y4A5 3859 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 MCIDASD6RGH6 385 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 J3QLI3 93 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 PLPP2O43688 288 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 PIP5K1CO60331 668 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 BCL10O95999 233 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 AVPP01185 164 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 ADRA2CP18825 462 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 CCNOP22674 350 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 CRYBB2P43320 205 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 UCP2P55851 309 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 PSME3P61289 254 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 FHL1Q13642 323 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 HIST3H3Q16695 136 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 HFEQ30201 348 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 NOXO1Q8NFA2 376 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 OR1J1Q8NGS3 322 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
PNKP-202ENST00000593706 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
PNKP-202ENST00000593706 SGTBQ96EQ0 304 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 GAL3ST1Q99999 423 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 MRPL13Q9BYD1 178 aaKnown RBP12.55□□□□□ -0.4
PNKP-202ENST00000593706 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
PNKP-202ENST00000593706 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 NKIRAS2Q9NYR9 191 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 TGP01266 2768 aa12.55□□□□□ -0.4
PNKP-202ENST00000593706 A0A1W2PRG6 482 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 ISPDA4D126 451 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 NPIPB13A6NJU9 1138 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 NPIPB4C9JG80 1138 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 BLOC1S5-TXNDC5H3BN57 136 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 J3KTA2 159 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 NDUFAB1O14561 156 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 DEAF1O75398 565 aaPredicted RBP12.54□□□□□ -0.4
PNKP-202ENST00000593706 SERPINA1P01009 418 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 IGHV2-5P01817 119 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 IFNW1P05000 195 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 FUT1P19526 365 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 MOGQ16653 247 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 HDDC2Q7Z4H3 204 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 SYT14Q8NB59 555 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 NANPQ8TBE9 248 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 LZICQ8WZA0 190 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 RAB1CQ92928 201 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 NMD3Q96D46 503 aaKnown RBP12.54□□□□□ -0.4
PNKP-202ENST00000593706 ELMOD3Q96FG2 381 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 HSH2DQ96JZ2 352 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 ZNF347Q96SE7 839 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 KCTD14Q9BQ13 255 aaPredicted RBP12.54□□□□□ -0.4
PNKP-202ENST00000593706 KCNN2Q9H2S1 579 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 MED31Q9Y3C7 131 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 CACNG2Q9Y698 323 aa12.54□□□□□ -0.4
PNKP-202ENST00000593706 PLSCR5A0PG75 271 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 ZNF682O95780 498 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 F13BP05160 661 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 NCK1P16333 377 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 EGR1P18146 543 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 GCH1P30793 250 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 AQP2P41181 271 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 ZNF81P51508 661 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms