RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DUSP16Q9BY84 665 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 COA1Q9GZY4 146 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 PARLQ9H300 379 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 OR51B6Q9H340 312 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SP140LQ9H930 580 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 WDR54Q9H977 334 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ABCB10Q9NRK6 738 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 THAP10Q9P2Z0 257 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ZNF282Q9UDV7 671 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TUBGCP4Q9UGJ1 667 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 MRM2Q9UI43 246 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 IKZF3Q9UKT9 509 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 EMCNQ9ULC0 261 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 PAIP2BQ9ULR5 123 aaKnown RBP3.97□□□□□ -1.77
SMAD4-216ENST00000593223 AP3M1Q9Y2T2 418 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 TMED7Q9Y3B3 224 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 SMAD5-AS1Q9Y6J3 95 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 ECM29Q5VYK3 1845 aa3.97□□□□□ -1.77
SMAD4-216ENST00000593223 UMODL1Q5DID0 1318 aa3.96□□□□□ -1.77
SMAD4-216ENST00000593223 A0A1W2PRD5 423 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SH3PXD2BA1X283 911 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 LRRC30A6NM36 301 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF99A8MXY4 864 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SIGLEC5O15389 551 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 TSPAN2O60636 221 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 N4BP1O75113 896 aaKnown RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SNAPINO95295 136 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 DEXIO95424 95 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 F10P00742 488 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ADORA3P0DMS8 318 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MAS1LP35410 378 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 UGT2B10P36537 528 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 GNG10P50151 68 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 DUSP3P51452 185 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 CCR8P51685 355 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 RAP1GDS1P52306 607 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 EFNB2P52799 333 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ATP1B3P54709 279 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 DSCR10P59022 87 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SCRN3Q0VDG4 424 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 GK3PQ14409 553 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 TMED2Q15363 201 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 EXOC3L4Q17RC7 722 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 C5orf64Q2M2E5 130 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 CCDC153Q494R4 210 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ACTBL2Q562R1 376 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 PIGGQ5H8A4 983 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 CELF3Q5SZQ8 465 aaKnown RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 LYPLAL1Q5VWZ2 237 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 LIPJQ5W064 366 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SLC27A4Q6P1M0 643 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 C17orf107Q6ZR85 190 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 HDDC2Q7Z4H3 204 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 DHDDSQ86SQ9 333 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF546Q86UE3 836 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SLC51BQ86UW2 128 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 RNF130Q86XS8 419 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MARCH9Q86YJ5 346 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 OR4N5Q8IXE1 308 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF100Q8IYN0 542 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ENTHD1Q8IYW4 607 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ABHD12Q8N2K0 398 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 TTC29Q8NA56 475 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 INO80EQ8NBZ0 244 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 STXBP6Q8NFX7 210 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 OR5D18Q8NGL1 313 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MRAPQ8TCY5 172 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 RNF133Q8WVZ7 376 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 DYDC1Q8WWB3 177 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 TMEM37Q8WXS4 190 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MRPL53Q96EL3 112 aaKnown RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 PELI1Q96FA3 418 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 PPP1R36Q96LQ0 422 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF597Q96LX8 424 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MCCC1Q96RQ3 725 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 S1PR3Q99500 378 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 RAB11FIP5Q9BXF6 653 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 PIGUQ9H490 435 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 TUBB1Q9H4B7 451 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 HEXA-AS1Q9H8Q6 139 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 POLE4Q9NR33 117 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 SAMSN1Q9NSI8 373 aaKnown RBP3.96□□□□□ -1.78
SMAD4-216ENST00000593223 C19orf12Q9NSK7 152 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 STMN3Q9NZ72 180 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 GNG12Q9UBI6 72 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 C3orf18Q9UK00 162 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 HYOU1Q9Y4L1 999 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 PEX16Q9Y5Y5 336 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 RFX7Q2KHR2 1363 aa3.96□□□□□ -1.78
SMAD4-216ENST00000593223 MN1Q10571 1320 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-216ENST00000593223 ROCK2O75116 1388 aaKnown RBP3.95□□□□□ -1.78
SMAD4-216ENST00000593223 IGLV4-3A0A075B6K6 122 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 A0A0J9YVX5 310 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 CCDC182A6NF36 153 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 CENPXA8MT69 81 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 H3BN98 237 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 INPP4BO15327 924 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 MLNRO43193 412 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 XRCC2O43543 280 aa3.95□□□□□ -1.78
SMAD4-216ENST00000593223 GMDSO60547 372 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms