RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CHST2Q9Y4C5 530 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 DSPPQ9NZW4 1301 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 LRP5LA4QPB2 252 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 ARRDC5A6NEK1 342 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 B4DSR2 109 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 SYNGR3O43761 229 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 UPK3AO75631 287 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 MFN2O95140 757 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 HPRP00739 348 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 PNMTP11086 282 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 THBS4P35443 961 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 RAD23AP54725 363 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 CLDN17P56750 224 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 RPS23P62266 143 aaKnown RBP8.15□□□□□ -1.1
BRCA1-226ENST00000591534 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.1
BRCA1-226ENST00000591534 GALK2Q01415 458 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 NPRL3Q12980 569 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 SELPLGQ14242 412 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 TRIP10Q15642 601 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 OR2T5Q6IEZ7 315 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF836Q6ZNA1 936 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 GLCCI1Q86VQ1 547 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 COMTD1Q86VU5 262 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 EPHX4Q8IUS5 362 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 ADGRG5Q8IZF4 528 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 OR2T29Q8NH02 315 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 SLC38A4Q969I6 547 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 SNX18Q96RF0 628 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 SEPHS2Q99611 448 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 EPYCQ99645 322 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 DOK1Q99704 481 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 RBM4BQ9BQ04 359 aaKnown RBP8.15□□□□□ -1.1
BRCA1-226ENST00000591534 RBM4Q9BWF3 364 aaKnown RBP8.15□□□□□ -1.1
BRCA1-226ENST00000591534 C12orf10Q9HB07 376 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 CRLF2Q9HC73 371 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 TESQ9UGI8 421 aaKnown RBP8.15□□□□□ -1.1
BRCA1-226ENST00000591534 GPR160Q9UJ42 338 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 GRIP1Q9Y3R0 1128 aa8.15□□□□□ -1.1
BRCA1-226ENST00000591534 ALPK2Q86TB3 2170 aa8.15□□□□□ -1.11
BRCA1-226ENST00000591534 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.11
BRCA1-226ENST00000591534 LOC102725191A0A1B0GVB3 256 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 TCRBV5S2A0A599 114 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 SH3PXD2BA1X283 911 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF99A8MXY4 864 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 G3V2T6 193 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 M0R233 179 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 NPIPB7O75200 414 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF432O94892 652 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ADRA2AP08913 450 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 PRG2P13727 222 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ANXA8P13928 327 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 NCK1P16333 377 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ATP6V1B2P21281 511 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 CALCRP30988 508 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 RPS5P46782 204 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 PTDSS1P48651 473 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 P2RY4P51582 365 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 CDH15P55291 814 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 SELENOVP59797 346 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 TUBA1BP68363 451 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 TUBA4AP68366 448 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 HGFACQ04756 655 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ST3GAL3Q11203 375 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 SNTB2Q13425 540 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 CEACAM16Q2WEN9 425 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 XP32Q5T750 250 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 FAM69AQ5T7M9 428 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 SHQ1Q6PI26 577 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZBTB49Q6ZSB9 765 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 TUBA1AQ71U36 451 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 H1FNTQ75WM6 255 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 MEX3DQ86XN8 651 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 CLIP4Q8N3C7 705 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 OR5K1Q8NHB7 308 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF418Q8TF45 676 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 DNAJA4Q8WW22 397 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZMYND19Q96E35 227 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM27Q9HBJ8 222 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 GPR35Q9HC97 309 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF346Q9UL40 294 aaKnown RBP8.14□□□□□ -1.11
BRCA1-226ENST00000591534 POFUT2Q9Y2G5 429 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ENPP4Q9Y6X5 453 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 PLCE1Q9P212 2302 aa8.14□□□□□ -1.11
BRCA1-226ENST00000591534 ANK2Q01484 3957 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 TRAV36DV7A0A075B6V5 113 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 IGHV2OR16-5A0A0B4J2B6 119 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF726A6NNF4 738 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 FTCDNL1E5RQL4 147 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 M0R3G1 203 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 RAB36O95755 333 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 TFP02787 698 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 CD79AP11912 226 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ACADSP16219 412 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 NR4A1P22736 598 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 AQP1P29972 269 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 MSX2P35548 267 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-226ENST00000591534 GPR6P46095 362 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM33P57088 247 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 RGS8P57771 180 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms