RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 PGM2L1Q6PCE3 622 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF620Q6ZNG0 422 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 PTCHD4Q6ZW05 846 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 AQP12AQ8IXF9 295 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 SVOPLQ8N434 492 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 OR52L1Q8NGH7 329 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 AKR7LQ8NHP1 331 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 POP5Q969H6 163 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
SCAMP4-212ENST00000590266 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 H7C1Q1 480 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 SOX14O95416 240 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 PTHP01270 115 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 SCG5P05408 212 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF35P13682 527 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 MSR1P21757 451 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 NR4A1P22736 598 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 HMGA2P52926 109 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 MICAQ29983 383 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 UGT2A3Q6UWM9 527 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 PRSS57Q6UWY2 283 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 PAQR4Q8N4S7 273 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 LINC00471Q8N535 108 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 PLK3Q9H4B4 646 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 BARX1Q9HBU1 254 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 POLE4Q9NR33 117 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 TBC1D23Q9NUY8 699 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 SLC7A8Q9UHI5 535 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 COA3Q9Y2R0 106 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
SCAMP4-212ENST00000590266 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 NF1P21359 2839 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 B9A039 149 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 E2F6O75461 281 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 KHDRBS3O75525 346 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 ATP5HO75947 161 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 LY6HO94772 140 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 GPANK1O95872 356 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 RENP00797 406 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 CST2P09228 141 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 HIST1H1CP16403 213 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 PCBD1P61457 104 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 PSG4Q00888 419 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 MST1LQ2TV78 715 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 OR10G2Q8NGC3 310 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 C18orf12Q96KH6 178 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 SMR3AQ99954 134 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 BDH2Q9BUT1 245 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF416Q9BWM5 594 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 PLA2G12AQ9BZM1 189 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 LRMDAQ9H2I8 198 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 FN3KQ9H479 309 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 SRA1Q9HD15 236 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 DYNLRB1Q9NP97 96 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 CDH10Q9Y6N8 788 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 MED13LQ71F56 2210 aa12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-212ENST00000590266 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 H7C417 338 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 AHCYL1O43865 530 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 MGRN1O60291 552 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 MPZL1O95297 269 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 TXNDC12O95881 172 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 LCKP06239 509 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 STOMP27105 288 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 TNK1Q13470 666 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 CARTPTQ16568 116 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF770Q6IQ21 691 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 GLB1L2Q8IW92 636 aa12.11□□□□□ -0.47
SCAMP4-212ENST00000590266 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms