RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SLC22A31A6NKX4 558 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 UBL3O95164 117 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 CLDN1O95832 211 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 CLIC3O95833 236 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 GPANK1O95872 356 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 GAAP10253 952 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 CD79AP11912 226 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ZNF823P16415 610 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 PAX7P23759 505 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 GSTT1P30711 240 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 PCBD1P61457 104 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 SNRPGP62308 76 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 TEKQ02763 1124 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 PPA1Q15181 289 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 KCNMB1Q16558 191 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 SLC36A2Q495M3 483 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 C6orf52Q5T4I8 152 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 FAM27BQ5VT28 67 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 AADACL4Q5VUY2 407 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 MEDAGQ5VYS4 303 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 C11orf40Q8WZ69 217 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 TFAP2CQ92754 450 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 RFKQ969G6 155 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 UBE2FQ969M7 185 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 ZC3HAV1LQ96H79 300 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 Q96MT0 163 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 RNF121Q9H920 327 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 MOV10Q9HCE1 1003 aaKnown RBP11.92□□□□□ -0.5
VMP1-210ENST00000589823 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
VMP1-210ENST00000589823 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 A0A1W2PR80 420 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SNTNA6NMZ2 147 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 C12orf71A8MTZ7 269 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 CASKO14936 926 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 MPZL1O95297 269 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 HLA-HP01893 362 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 HRGP04196 525 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SCG5P05408 212 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 CST2P09228 141 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SLC2A5P22732 501 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 KIR2DL3P43628 341 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 CDH11P55287 796 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 TUBA1BP68363 451 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 TUBA4AP68366 448 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 ADAM8P78325 824 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 TAB1Q15750 504 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 OCLNQ16625 522 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SLC25A30Q5SVS4 291 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 LINC01590Q5TEZ4 76 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 TMEM53Q6P2H8 277 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 UGT2A3Q6UWM9 527 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 TUBA1AQ71U36 451 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 WFDC8Q8IUA0 241 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 ZNF511Q8NB15 262 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 DACH2Q96NX9 599 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 WFIKKN1Q96NZ8 548 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 TEAD3Q99594 435 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
VMP1-210ENST00000589823 WACQ9BTA9 647 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 ZNF416Q9BWM5 594 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 KCNG2Q9UJ96 466 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 SLC25A15Q9Y619 301 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 HSPE1-MOB4S4R3N1 261 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 CACNA1CQ13936 2221 aa11.91□□□□□ -0.5
VMP1-210ENST00000589823 CCDC182A6NF36 153 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 TMCC2O75069 709 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 ENTPD6O75354 484 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 RAB36O95755 333 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 TFP02787 698 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 HTR1FP30939 366 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 ARR3P36575 388 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 HCFC1P51610 2035 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 RAB1AP62820 205 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 PIGFQ07326 219 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 AQP6Q13520 282 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 ENDOGQ14249 297 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms