RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 KRT8P05787 483 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 GAAP10253 952 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ABOP16442 354 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 CD53P19397 219 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 RGS6P49758 472 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 GBX2P52951 348 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 GP2P55259 537 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 MRPS34P82930 218 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF85Q03923 595 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ETFDHQ16134 617 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 C3AR1Q16581 482 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ACSF3Q4G176 576 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 CCDC58Q4VC31 144 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF585AQ6P3V2 769 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 C16orf87Q6PH81 154 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 FOXL2NBQ6ZUU3 175 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 DPY19L4Q7Z388 723 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TBX5Q99593 518 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF649Q9BS31 505 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 MROQ9BYG7 248 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 MRPL22Q9NWU5 206 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 UPB1Q9UBR1 384 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ALPK2Q86TB3 2170 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 METTL15A6NJ78 407 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TGM6O95932 706 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TPOP07202 933 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 SPARCP09486 303 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 MSR1P21757 451 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TPBGQ13641 420 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF544Q6NX49 715 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 FAM214BQ7L5A3 538 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF485Q8NCK3 441 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 OR5M9Q8NGP3 310 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 RAB2BQ8WUD1 216 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 THEM6Q8WUY1 208 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 SPRYD4Q8WW59 207 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 UFD1Q92890 307 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TMIGD2Q96BF3 282 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 SNRNP40Q96DI7 357 aaKnown RBP9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 KCNN2Q9H2S1 579 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 SIAEQ9HAT2 523 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 CRLF2Q9HC73 371 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 POLE4Q9NR33 117 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 TAS2R16Q9NYV7 291 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 LUZP4Q9P127 313 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
NEDD4L-224ENST00000588712 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF587BE7ETH6 402 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 J3QLW9 94 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 FARS2O95363 451 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ADRA2AP08913 450 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 EDN3P14138 238 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 CD36P16671 472 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 CPEP16870 476 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ZNF19P17023 458 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 PSMA1P25786 263 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 AGTR1P30556 359 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 SH3BGRP55822 239 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 PCBD1P61457 104 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ROM1Q03395 351 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 TRAM1Q15629 374 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 OR2G6Q5TZ20 316 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 FAM27BQ5VT28 67 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 GFRALQ6UXV0 394 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 GDPGP1Q6ZNW5 385 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 VASH1Q7L8A9 365 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 FGD2Q7Z6J4 655 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 CLVS1Q8IUQ0 354 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 C11orf40Q8WZ69 217 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 TP63Q9H3D4 680 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 C1orf198Q9H425 327 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 GPR35Q9HC97 309 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 RSL24D1Q9UHA3 163 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 CYB5R1Q9UHQ9 305 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 POLR1DQ9Y2S0 133 aa9.34□□□□□ -0.91
NEDD4L-224ENST00000588712 ARPC4-TTLL3A0A0A6YYG9 625 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 H3BSA7 217 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 UPK3AO75631 287 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 IL2RAP01589 272 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 CD1AP06126 327 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 TIMP3P35625 211 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 TDGF1P3P51864 188 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 PER3P56645 1201 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 EIF2B1Q14232 305 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 SGCAQ16586 387 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 C1orf185Q5T7R7 199 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 RPL22L1Q6P5R6 122 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
NEDD4L-224ENST00000588712 SYT9Q86SS6 491 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms