RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 RRM2P31350 389 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 CDAP32320 146 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 RPL4P36578 427 aaKnown RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 GSSP48637 474 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 PCBD1P61457 104 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 GALK2Q01415 458 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 SPIBQ01892 262 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 PLP2Q04941 152 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 KRR1Q13601 381 aaKnown RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 PABPC1L2AQ5JQF8 200 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 SMARCD3Q6STE5 483 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 RINLQ6ZS11 566 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 SVOPLQ8N434 492 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 LINC00471Q8N535 108 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 CPEB3Q8NE35 698 aaKnown RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 NEU4Q8WWR8 484 aaPredicted RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 FAM168AQ92567 244 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 HTRA1Q92743 480 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 ASB9Q96DX5 294 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 MRPL37Q9BZE1 423 aaKnown RBP9.03□□□□□ -0.96
TPM4-209ENST00000588483 BCL2L14Q9BZR8 327 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 TRIM15Q9C019 465 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 RAB1BQ9H0U4 201 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 KCNN2Q9H2S1 579 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 POLE4Q9NR33 117 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 TAS2R1Q9NYW7 299 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 AURKCQ9UQB9 309 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 LYVE1Q9Y5Y7 322 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 V9GYQ6 96 aa9.03□□□□□ -0.96
TPM4-209ENST00000588483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.02□□□□□ -0.975e-6■■■■□ 22.8
TPM4-209ENST00000588483 LOC390937A0A1W2PQ73 354 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 COX5BP10606 129 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 CTLA4P16410 223 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 MSR1P21757 451 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 LAP3P28838 519 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 IFNGR2P38484 337 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
TPM4-209ENST00000588483 PDLIM4P50479 330 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 RPS6KA3P51812 740 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 PSG4Q00888 419 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 MS4A2Q01362 244 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 TSPAN31Q12999 210 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 ENDOGQ14249 297 aaKnown RBP9.02□□□□□ -0.97
TPM4-209ENST00000588483 GK3PQ14409 553 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 RFX4Q33E94 735 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 ZNF770Q6IQ21 691 aaPredicted RBP9.02□□□□□ -0.97
TPM4-209ENST00000588483 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 CYP2R1Q6VVX0 501 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 ZNF620Q6ZNG0 422 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 TRPM8Q7Z2W7 1104 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 DHFR2Q86XF0 187 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 LRRC18Q8N456 261 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 OR4C15Q8NGM1 316 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 NSMAFQ92636 917 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 POM121L2Q96KW2 1035 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 OR2H1Q9GZK4 316 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 WNT5BQ9H1J7 359 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 LRMDAQ9H2I8 198 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 OR52D1Q9H346 318 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 RNF121Q9H920 327 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 CCNB1IP1Q9NPC3 277 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 TIMM10BQ9Y5J6 103 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 JMJD1CQ15652 2540 aa9.02□□□□□ -0.97
TPM4-209ENST00000588483 ABCA2Q9BZC7 2435 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 CUBNO60494 3623 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 LOC100509620A0A075B734 347 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 H3BSA7 217 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 H7C1C5 153 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 M0R233 179 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 ACOT8O14734 319 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 IDH3BO43837 385 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 CD5LO43866 347 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 OR10H3O60404 316 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 LY6HO94772 140 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 SCG5P05408 212 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 ERCC1P07992 297 aaPredicted RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 HOXB6P17509 224 aaKnown RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 STOMP27105 288 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 GIFP27352 417 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 APEX1P27695 318 aaKnown RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 SLC6A6P31641 620 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 APLNRP35414 380 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 RAD52P43351 418 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 UCP2P55851 309 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 LSM6P62312 80 aaKnown RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 LCN6P62502 163 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 HSF2Q03933 536 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 TRAP1Q12931 704 aaKnown RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 KCNMB1Q16558 191 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 SGCAQ16586 387 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 RGS7BPQ6MZT1 257 aaPredicted RBP9.01□□□□□ -0.97
TPM4-209ENST00000588483 RPL13AP3Q6NVV1 102 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 PTCHD4Q6ZW05 846 aa9.01□□□□□ -0.97
TPM4-209ENST00000588483 FANK1Q8TC84 345 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms