RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 ARHGEF28Q8N1W1 1705 aaKnown RBP3.94□□□□□ -1.78
TUBD1-208ENST00000588009 KIF27Q86VH2 1401 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 TET3O43151 1660 aa3.94□□□□□ -1.78
TUBD1-208ENST00000588009 PSMB11A5LHX3 300 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 TRDMT1O14717 391 aaKnown RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 AIREO43918 545 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 PLEKP08567 350 aaPredicted RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 CHTF8P0CG12 524 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 UBCP0CG48 685 aaKnown RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 ICAM2P13598 275 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 FOLR1P15328 257 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF250P15622 560 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 PRKACAP17612 351 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 GABRR1P24046 479 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 AQP2P41181 271 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 SLC1A2P43004 574 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 DAOAP59103 153 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 PRPS1P60891 318 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 FZD2Q14332 565 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 SF3A2Q15428 464 aaKnown RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 BEX5Q5H9J7 111 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 STUMQ69YW2 141 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 RALGPS2Q86X27 583 aaPredicted RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 TTC29Q8NA56 475 aaPredicted RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 SDR42E1Q8WUS8 393 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 UCN3Q969E3 161 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 CFAP53Q96M91 514 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 ACTR3CQ9C0K3 210 aaPredicted RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 DEFB127Q9H1M4 99 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 TDRD3Q9H7E2 651 aaKnown RBP3.93□□□□□ -1.78
TUBD1-208ENST00000588009 MTCH1Q9NZJ7 389 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 LGALS13Q9UHV8 139 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 GOLT1BQ9Y3E0 138 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 ASXL1Q8IXJ9 1541 aa3.93□□□□□ -1.78
TUBD1-208ENST00000588009 EHBP1L1Q8N3D4 1523 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 GLYATL1P3A0A0U1RQE8 302 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 FAM25EA8MYX2 175 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 MMP23AO75900 390 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 SERPINE2P07093 398 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 ACSM4P0C7M7 580 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 MGMTP16455 207 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CRISP1P54107 249 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 DSCR10P59022 87 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 RAD51Q06609 339 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 KIAA0087Q14695 138 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 NKAIN1Q4KMZ8 207 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CTRB2Q6GPI1 263 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 SCARA5Q6ZMJ2 495 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 Q6ZR54 194 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 HDDC2Q7Z4H3 204 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CMC1Q7Z7K0 106 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 C8orf31Q8N9H6 132 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 OR1N2Q8NGR9 330 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 OR52E5Q8NH55 327 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 B3GALT6Q96L58 329 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 OPALINQ96PE5 141 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CCDC59Q9P031 241 aaKnown RBP3.92□□□□□ -1.78
TUBD1-208ENST00000588009 GNPTGQ9UJJ9 305 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CDH10Q9Y6N8 788 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 ABCC5O15440 1437 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.92□□□□□ -1.78
TUBD1-208ENST00000588009 MROH7-TTC4A0A0A0MT08 1334 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF518AQ6AHZ1 1483 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 CACNA1BQ00975 2339 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 ATRXP46100 2492 aa3.92□□□□□ -1.78
TUBD1-208ENST00000588009 SETXQ7Z333 2677 aaKnown RBP3.91□□□□□ -1.78
TUBD1-208ENST00000588009 ZNF816-ZNF321PA0A0X1KG74 233 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 GABRR3A8MPY1 467 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 A8MUA0 341 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
TUBD1-208ENST00000588009 M0R3G1 203 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 SUPT7LO94864 414 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 CD160O95971 181 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 CRYGCP07315 174 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 GKN3PP0CG01 181 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 VCANP13611 3396 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 CPN2P22792 545 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 BCAP31P51572 246 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 CLDN18P56856 261 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 CARD18P57730 90 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 IFT88Q13099 833 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 AQP6Q13520 282 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 PGGHGQ32M88 737 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 LCN12Q6JVE5 192 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 SPESP1Q6UW49 350 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 PEX26Q7Z412 305 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 SAMD9LQ8IVG5 1584 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 ZBED8Q8IZ13 594 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 TMEM61Q8N0U2 210 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 JAGN1Q8N5M9 183 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 NEIL3Q8TAT5 605 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 FAM151AQ8WW52 585 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 DCUN1D4Q92564 292 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 ECHDC3Q96DC8 303 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 PIK3IP1Q96FE7 263 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 JSRP1Q96MG2 331 aaPredicted RBP3.91□□□□□ -1.78
TUBD1-208ENST00000588009 SH3GL3Q99963 347 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 NRIP2Q9BQI9 281 aa3.91□□□□□ -1.78
TUBD1-208ENST00000588009 PYGO2Q9BRQ0 406 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms