RNA–Protein interactions for RNA: ENST00000587323.5

CIRBP-213, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-213ENST00000587323 PERPQ96FX8 193 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 MS4A3Q96HJ5 214 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 RAB3IPQ96QF0 476 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-213ENST00000587323 SNX18Q96RF0 628 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 NMNAT3Q96T66 252 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 NUAK2Q9H093 628 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 ZNF224Q9NZL3 707 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 KIF17Q9P2E2 1029 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 COA3Q9Y2R0 106 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-213ENST00000587323 TIMM10BQ9Y5J6 103 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 PMF1-BGLAPU3KQ54 211 aa17.27■□□□□ 0.36
CIRBP-213ENST00000587323 IGHV2OR16-5A0A0B4J2B6 119 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 IFNGP01579 166 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 CTLA4P16410 223 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 CALCRP30988 508 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 RIPPLY3P57055 190 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.26■□□□□ 0.357e-8■■□□□ 13.6
CIRBP-213ENST00000587323 ETFDHQ16134 617 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 PGGHGQ32M88 737 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 SHEQ5VZ18 495 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 KRT80Q6KB66 452 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 B3GLCTQ6Y288 498 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 PTCHD4Q6ZW05 846 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 SYT9Q86SS6 491 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 SLC30A7Q8NEW0 376 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 OR2T33Q8NG76 320 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 FGFBP3Q8TAT2 258 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 NABP1Q96AH0 204 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 NRBF2Q96F24 287 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 NIPSNAP1Q9BPW8 284 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 TEX12Q9BXU0 123 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 NOX3Q9HBY0 568 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 POLE4Q9NR33 117 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 CA10Q9NS85 328 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 ARMC1Q9NVT9 282 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 POLR1DQ9Y2S0 133 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 CCDC168Q8NDH2 2452 aa17.26■□□□□ 0.35
CIRBP-213ENST00000587323 ROS1P08922 2347 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 SOX14O95416 240 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 HLA-DQA2P01906 255 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 ZNF32P17041 273 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 CCNOP22674 350 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 POU1F1P28069 291 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 SERPINF1P36955 418 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 ATP5J2P56134 94 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 SNTB2Q13425 540 aaKnown RBP17.25■□□□□ 0.35
CIRBP-213ENST00000587323 PABPC1L2AQ5JQF8 200 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 UNQ6126/PRO20091Q6UXV3 157 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 CD300LDQ6UXZ3 194 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 SDR9C7Q8NEX9 313 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 NUP37Q8NFH4 326 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 OR10H5Q8NGA6 315 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 OR5K1Q8NHB7 308 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 FBXO17Q96EF6 278 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 TRAF4Q9BUZ4 470 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-213ENST00000587323 GRIP2Q9C0E4 1043 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 CXXC4Q9H2H0 198 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 RPRD1BQ9NQG5 326 aaKnown RBP17.25■□□□□ 0.35
CIRBP-213ENST00000587323 EIF3KQ9UBQ5 218 aaKnown RBP17.25■□□□□ 0.35
CIRBP-213ENST00000587323 KLHL21Q9UJP4 597 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 B9D1Q9UPM9 204 aa17.25■□□□□ 0.35
CIRBP-213ENST00000587323 PTH2RP49190 550 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 RPS23P62266 143 aaKnown RBP17.24■□□□□ 0.35
CIRBP-213ENST00000587323 GLO1Q04760 184 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 SCRN3Q0VDG4 424 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 CCNIQ14094 377 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 SHQ1Q6PI26 577 aaKnown RBP17.24■□□□□ 0.35
CIRBP-213ENST00000587323 FOXL2NBQ6ZUU3 175 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 TMEM179BQ7Z7N9 219 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 DTX2Q86UW9 622 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 MYPOPQ86VE0 399 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-213ENST00000587323 HIPK1Q86Z02 1210 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 ZNF75AQ96N20 296 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 FOXN4Q96NZ1 517 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 ZNF416Q9BWM5 594 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 CDADC1Q9BWV3 514 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 GSX2Q9BZM3 304 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 EMC7Q9NPA0 242 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-213ENST00000587323 FBXO9Q9UK97 447 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-213ENST00000587323 CMAHPQ9Y471 501 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 TACC2O95359 2948 aa17.24■□□□□ 0.35
CIRBP-213ENST00000587323 G3V2T6 193 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 BHLHE40O14503 412 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 MMP7P09237 267 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-213ENST00000587323 OR4A8P0C604 315 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 ZNF35P13682 527 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 PRKACGP22612 351 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 NR4A1P22736 598 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 STOMP27105 288 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 CDKN1AP38936 164 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 RAD52P43351 418 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 GDI2P50395 445 aaKnown RBP17.23■□□□□ 0.35
CIRBP-213ENST00000587323 LSM6P62312 80 aaKnown RBP17.23■□□□□ 0.35
CIRBP-213ENST00000587323 SNRPD2P62316 118 aaKnown RBP17.23■□□□□ 0.35
CIRBP-213ENST00000587323 RAB35Q15286 201 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 ATP6AP1Q15904 470 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 SLC36A3Q495N2 470 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 LNX2Q8N448 690 aa17.23■□□□□ 0.35
CIRBP-213ENST00000587323 OR2T4Q8NH00 348 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms