RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 TAS2R41P59536 307 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 CD47Q08722 323 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 TOP3AQ13472 1001 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 PIN1Q13526 163 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 ARMC4Q5T2S8 1044 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 TEX29Q8N6K0 151 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 CLDN22Q8N7P3 220 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 SGMS2Q8NHU3 365 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 KLF14Q8TD94 323 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 GEMIN6Q8WXD5 167 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 DUX5Q96PT3 197 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 C1QTNF5Q9BXJ0 243 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 PCDHAC1Q9H158 963 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 MSL2Q9HCI7 577 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 DCAF16Q9NXF7 216 aa17.05■□□□□ 0.32
CLPTM1-204ENST00000585961 WNK2Q9Y3S1 2297 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 PLSCR5A0PG75 271 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 ZSCAN5BA6NJL1 495 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 J3QLI3 93 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 UBOX5O94941 541 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 PRSS23O95084 383 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 DAP3P51398 398 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 MRPS34P82930 218 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 VMACQ2NL98 169 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 NRN1LQ496H8 165 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 AWAT1Q58HT5 328 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 SLC25A47Q6Q0C1 308 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 SLC30A8Q8IWU4 369 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 ABHD4Q8TB40 342 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 TMEM239Q8WW34 195 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 NABP1Q96AH0 204 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 SEPHS2Q99611 448 aa17.04■□□□□ 0.32
CLPTM1-204ENST00000585961 FPR2P25090 351 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 LAP3P28838 519 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 PPP1CBP62140 327 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 C10orf128Q5T292 105 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 INTS11Q5TA45 600 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 TREML1Q86YW5 311 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 EGLN1Q9GZT9 426 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 WNT5BQ9H1J7 359 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 MMP26Q9NRE1 261 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 DDX28Q9NUL7 540 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 EGFL7Q9UHF1 273 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 PCDHGB1Q9Y5G3 927 aa17.03■□□□□ 0.32
CLPTM1-204ENST00000585961 KCNAB3O43448 404 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 PIP5K1CO60331 668 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 LIMS1P48059 325 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 ZNF133P52736 654 aaPredicted RBP17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 RABL3Q5HYI8 236 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 FAM209AQ5JX71 171 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 NANOGP8Q6NSW7 305 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 CCDC80Q76M96 950 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 IGFN1Q86VF2 1251 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 ST7LQ8TDW4 575 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 NMD3Q96D46 503 aaKnown RBP17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 ZMYND19Q96E35 227 aaPredicted RBP17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 KLHL21Q9UJP4 597 aa17.02■□□□□ 0.32
CLPTM1-204ENST00000585961 FBP2O00757 339 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 UBA52P62987 128 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 MBNL2Q5VZF2 373 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 ZNF774Q6NX45 483 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 RFPL4BQ6ZWI9 263 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 MICU2Q8IYU8 434 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 SIGLECL1Q8N7X8 197 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 C4orf45Q96LM5 186 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 RBP7Q96R05 134 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 ECSITQ9BQ95 431 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 OR2H1Q9GZK4 316 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 TXNIPQ9H3M7 391 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 NPHS2Q9NP85 383 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 MED31Q9Y3C7 131 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 TIMM10BQ9Y5J6 103 aa17.01■□□□□ 0.31
CLPTM1-204ENST00000585961 CENPBD1B2RD01 187 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 SCG5P05408 212 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 FUT4P22083 530 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 RBM34P42696 430 aaKnown RBP17■□□□□ 0.31
CLPTM1-204ENST00000585961 CTXN1P60606 82 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 CYLC2Q14093 348 aaPredicted RBP17■□□□□ 0.31
CLPTM1-204ENST00000585961 ALG10Q5BKT4 473 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 TTMPQ5BVD1 217 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 FAM27BQ5VT28 67 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 HDDC2Q7Z4H3 204 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 ALDH16A1Q8IZ83 802 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 BCL6BQ8N143 479 aaPredicted RBP17■□□□□ 0.31
CLPTM1-204ENST00000585961 RASSF5Q8WWW0 418 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 DVL3Q92997 716 aaPredicted RBP17■□□□□ 0.31
CLPTM1-204ENST00000585961 POFUT1Q9H488 388 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 NPTNQ9Y639 398 aa17■□□□□ 0.31
CLPTM1-204ENST00000585961 A0A1W2PPL8 197 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 TRAPPC2LH3BP13 241 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 TIMM8AO60220 97 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 OR5F1O95221 314 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 GATA3P23771 443 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 GUCA1AP43080 201 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 YAP1P46937 504 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 RPL27P61353 136 aaKnown RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 TNFAIP6P98066 277 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 SLC3A1Q07837 685 aa16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 SF3A3Q12874 501 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLPTM1-204ENST00000585961 PSG7Q13046 419 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms