RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SERPINI2O75830 405 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 SULT1C4O75897 302 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 GABARAPO95166 117 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 PLGP00747 810 aaPredicted RBP11.19□□□□□ -0.62
VMP1-202ENST00000585847 CD1AP06126 327 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
VMP1-202ENST00000585847 TACSTD2P09758 323 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 LIMS3P0CW19 117 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 LIMS4P0CW20 117 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 PGA4P0DJD7 388 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 PGA3P0DJD8 388 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
VMP1-202ENST00000585847 GTF2A1P52655 376 aaPredicted RBP11.19□□□□□ -0.62
VMP1-202ENST00000585847 BIDP55957 195 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 CLRN1P58418 232 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 GUSBP1Q15486 140 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 MED22Q15528 200 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 C10orf128Q5T292 105 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 KCTD18Q6PI47 426 aaPredicted RBP11.19□□□□□ -0.62
VMP1-202ENST00000585847 DEGS2Q6QHC5 323 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 PLEKHG7Q6ZR37 379 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 FCRLAQ7L513 359 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 FAM220AQ7Z4H9 259 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 ANKRD13BQ86YJ7 626 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 GLB1L2Q8IW92 636 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 SLC35F2Q8IXU6 374 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 NAXEQ8NCW5 288 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 BBS1Q8NFJ9 593 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 OR10H4Q8NGA5 316 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 WNT2BQ93097 391 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 MGLLQ99685 303 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 HCAR1Q9BXC0 346 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 NUAK2Q9H093 628 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 WDR76Q9H967 626 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 SIAEQ9HAT2 523 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 BCO1Q9HAY6 547 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 AASSQ9UDR5 926 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 B9D1Q9UPM9 204 aa11.19□□□□□ -0.62
VMP1-202ENST00000585847 FREM1Q5H8C1 2179 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 CCL21O00585 134 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 SLC16A7O60669 478 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 PTHP01270 115 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 RNF224P0DH78 156 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 TIMP3P35625 211 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 CSNK1A1P48729 337 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 RGS6P49758 472 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 GP2P55259 537 aaKnown RBP11.18□□□□□ -0.62
VMP1-202ENST00000585847 FOXF2Q12947 444 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 TPBGQ13641 420 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 KCNMB1Q16558 191 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 PCK2Q16822 640 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 CDONQ4KMG0 1287 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 OR2A2Q6IF42 318 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 SLC18B1Q6NT16 456 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ZNF322Q6U7Q0 402 aaPredicted RBP11.18□□□□□ -0.62
VMP1-202ENST00000585847 BCDIN3DQ7Z5W3 292 aaKnown RBP11.18□□□□□ -0.62
VMP1-202ENST00000585847 FJX1Q86VR8 437 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 TIGD4Q8IY51 512 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 OR6V1Q8N148 313 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ABHD3Q8WU67 409 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 UFD1Q92890 307 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 NMD3Q96D46 503 aaKnown RBP11.18□□□□□ -0.62
VMP1-202ENST00000585847 CCDC120Q96HB5 630 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 RHNO1Q9BSD3 238 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ALG8Q9BVK2 526 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 NDUFB11Q9NX14 153 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ENPP5Q9UJA9 477 aa11.18□□□□□ -0.62
VMP1-202ENST00000585847 ERRFI1Q9UJM3 462 aaPredicted RBP11.18□□□□□ -0.62
VMP1-202ENST00000585847 DIDO1Q9BTC0 2240 aaKnown RBP11.17□□□□□ -0.62
VMP1-202ENST00000585847 ALPK2Q86TB3 2170 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 A0A0G2JNJ9 132 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 SLC35F4A4IF30 521 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 CCDC160A6NGH7 325 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 SLC22A20A6NK97 555 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZNF716A6NP11 495 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 LRRTM2O43300 516 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZNF254O75437 659 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 INMTO95050 263 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZNF823P16415 610 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 NPR2P20594 1047 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 COL8A1P27658 744 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 NTF4P34130 210 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ENTPD1P49961 510 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZNF84P51523 738 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 LSM6P62312 80 aaKnown RBP11.17□□□□□ -0.62
VMP1-202ENST00000585847 PMPCAQ10713 525 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 CDSNQ15517 529 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ABHD12BQ7Z5M8 362 aaPredicted RBP11.17□□□□□ -0.62
VMP1-202ENST00000585847 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
VMP1-202ENST00000585847 LIX1LQ8IVB5 337 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 ZNF485Q8NCK3 441 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 OR10H5Q8NGA6 315 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 OR4F15Q8NGB8 312 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 OTOSQ8NHW6 89 aa11.17□□□□□ -0.62
VMP1-202ENST00000585847 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms