RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 HTR2AP28223 471 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 CD80P33681 288 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 MPV17P39210 176 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 ZNF81P51508 661 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 MMP15P51511 669 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 SELENOVP59797 346 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 ZNF621Q6ZSS3 439 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 SLC15A3Q8IY34 581 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 SLC22A24Q8N4F4 322 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 RNF148Q8N7C7 305 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 ICA1LQ8NDH6 482 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 ADPRHL1Q8NDY3 354 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 OR6N1Q8NGY5 312 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 C11orf40Q8WZ69 217 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 GTF2H4Q92759 462 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 RSRC1Q96IZ7 334 aaKnown RBP15.23■□□□□ 0.03
TOP3A-220ENST00000585031 LRGUKQ96M69 825 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 MOGAT1Q96PD6 335 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 MS4A7Q9GZW8 240 aaPredicted RBP15.23■□□□□ 0.03
TOP3A-220ENST00000585031 S100A14Q9HCY8 104 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.23■□□□□ 0.03
TOP3A-220ENST00000585031 PRORSD1PA6NEY8 169 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 HOXA3O43365 443 aaPredicted RBP15.22■□□□□ 0.03
TOP3A-220ENST00000585031 OR2T1O43869 369 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 SLC6A9P48067 706 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 SLC34A1Q06495 639 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 PAX8Q06710 450 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 ZNF362Q5T0B9 420 aaPredicted RBP15.22■□□□□ 0.03
TOP3A-220ENST00000585031 LRFN4Q6PJG9 635 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 DLEU7Q6UYE1 221 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 C17orf107Q6ZR85 190 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 C9orf139Q6ZV77 190 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 PIWIL3Q7Z3Z3 882 aaKnown RBP15.22■□□□□ 0.03
TOP3A-220ENST00000585031 GEMIN6Q8WXD5 167 aaKnown RBP15.22■□□□□ 0.03
TOP3A-220ENST00000585031 PANX1Q96RD7 426 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 BEX1Q9HBH7 125 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 B3GAT2Q9NPZ5 323 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 CMTM6Q9NX76 183 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 FBXL3Q9UKT7 428 aa15.22■□□□□ 0.03
TOP3A-220ENST00000585031 TRAV36DV7A0A075B6V5 113 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 A0A1B0GWA3 101 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 ACOT8O14734 319 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 SERPINI2O75830 405 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 MFN2O95140 757 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 ANP32DO95626 131 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 TSPAN15O95858 294 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 SBK2P0C263 348 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 PAX2Q02962 417 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 FAM209AQ5JX71 171 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 SPATA46Q5T0L3 261 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 OLFML2AQ68BL7 652 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 NANOGP8Q6NSW7 305 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 BRICD5Q6PL45 260 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 SPATA24Q86W54 205 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 DHFR2Q86XF0 187 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 HIPK4Q8NE63 616 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 SLC38A4Q969I6 547 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 TMEM54Q969K7 222 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 TMEM19Q96HH6 336 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 DCLRE1CQ96SD1 692 aaKnown RBP15.21■□□□□ 0.03
TOP3A-220ENST00000585031 KCTD14Q9BQ13 255 aaPredicted RBP15.21■□□□□ 0.03
TOP3A-220ENST00000585031 NANOGQ9H9S0 305 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 PATZ1Q9HBE1 687 aaKnown RBP15.21■□□□□ 0.03
TOP3A-220ENST00000585031 CDH20Q9HBT6 801 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 C1RLQ9NZP8 487 aa15.21■□□□□ 0.03
TOP3A-220ENST00000585031 NKX1-2Q9UD57 310 aaPredicted RBP15.21■□□□□ 0.03
TOP3A-220ENST00000585031 RFXANKO14593 260 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 GMNNO75496 209 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 SNAP29O95721 258 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 PLATP00750 562 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 CSNK1A1P48729 337 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 GSK3BP49841 420 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 RAG2P55895 527 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 TXNL4AP83876 142 aaKnown RBP15.2■□□□□ 0.02
TOP3A-220ENST00000585031 LIPEQ05469 1076 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 PMS2P3Q13401 168 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
TOP3A-220ENST00000585031 LRIF1Q5T3J3 769 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 PARP8Q8N3A8 854 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 OR52E2Q8NGJ4 325 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 IPCEF1Q8WWN9 437 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-220ENST00000585031 ECSITQ9BQ95 431 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 TNFRSF19Q9NS68 423 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 TMEM38BQ9NVV0 291 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 P2RX2Q9UBL9 471 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 NPTNQ9Y639 398 aa15.2■□□□□ 0.02
TOP3A-220ENST00000585031 ZNF726A6NNF4 738 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 F5H0A9 414 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-220ENST00000585031 PLPP3O14495 311 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 BAG2O95816 211 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 SELEP16581 610 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 WNT5AP41221 380 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 MTNR1AP48039 350 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 BIDP55957 195 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 MS4A2Q01362 244 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 PUDPQ08623 228 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 DEFB112Q30KQ8 113 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 RABL3Q5HYI8 236 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 THEM4Q5T1C6 240 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 Q6ZPA2 131 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms