RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 EHD1Q9H4M9 534 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 MEAF6Q9HAF1 191 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PDFQ9HBH1 243 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ZNHIT6Q9NWK9 470 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 UTP6Q9NYH9 597 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 SPATA7Q9P0W8 599 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SEC14L3Q9UDX4 400 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 FBXL4Q9UKA2 621 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 KIAA1257Q9ULG3 409 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 DIMT1Q9UNQ2 313 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 ZNF835Q9Y2P0 537 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NOSIPQ9Y314 301 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 MEMO1Q9Y316 297 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ETV7Q9Y603 341 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 COLEC10Q9Y6Z7 277 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CADP27708 2225 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 TRAV26-1A0A087WT03 109 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PPIAL4CA0A0B4J2A2 164 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 LINC00854A0A1B0GVQ3 168 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZNF732B4DXR9 585 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 H3BTX0 84 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CCL24O00175 119 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SDHDO14521 159 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CCSO14618 274 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 POLR3GO15318 223 aaPredicted RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 FCMRO60667 390 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 GOT2P00505 430 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 IVLP07476 585 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 HOXC4P09017 264 aaPredicted RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 PPIAL4GP0DN37 164 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 TROVE2P10155 538 aaKnown RBP eCLIP1.96□□□□□ -2.1
VAPA-208ENST00000584796 EZRP15311 586 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 ACKR3P25106 362 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PTBP1P26599 531 aaKnown RBP eCLIP1.96□□□□□ -2.13e-7■■■□□ 15.2
VAPA-208ENST00000584796 OR1E1P30953 314 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 RBMXP38159 391 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 MAGEA1P43355 309 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SYKP43405 635 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CAPZBP47756 277 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 NPY2RP49146 381 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 GSK3BP49841 420 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 KPNA2P52292 529 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 CARD18P57730 90 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 RHOAP61586 193 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SRPXP78539 464 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CDKL1Q00532 357 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 FGL1Q08830 312 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 EXOSC2Q13868 293 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 IL18Q14116 193 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 MESDQ14696 234 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 P2RY14Q15391 338 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 OR1C1Q15619 314 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZIC1Q15915 447 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CLPPQ16740 277 aaPredicted RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 PCK2Q16822 640 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CCDC14Q49A88 953 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 BCL7AQ4VC05 210 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 FBXO48Q5FWF7 155 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SPANXN2Q5MJ10 180 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 LINC00242Q5T6M2 205 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PRAMEF5Q5TYX0 476 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 LYPLAL1Q5VWZ2 237 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PRAMEF6Q5VXH4 476 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PYHIN1Q6K0P9 492 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SLC27A4Q6P1M0 643 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 PAMR1Q6UXH9 720 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 C17orf107Q6ZR85 190 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 TMUB2Q71RG4 321 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 BZW1Q7L1Q6 419 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 CARM1Q86X55 608 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 DOLPP1Q86YN1 238 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZNF547Q8IVP9 402 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 VSTM4Q8IW00 320 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZADH2Q8N4Q0 377 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 NPWQ8N729 165 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZNF321PQ8N8H1 164 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 LRTM2Q8N967 370 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ZNF557Q8N988 423 aaPredicted RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 DNAAF3Q8N9W5 541 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 MLKLQ8NB16 471 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SYT14Q8NB59 555 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CCDC197Q8NCU1 140 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 MNS1Q8NEH6 495 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SPATA4Q8NEY3 305 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 OR5AU1Q8NGC0 362 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 OR5D13Q8NGL4 314 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 OR4Q3Q8NH05 313 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 OR8K3Q8NH51 312 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 JOSD2Q8TAC2 188 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 P3H4Q92791 437 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 MCUR1Q96AQ8 359 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ISG20Q96AZ6 181 aaKnown RBP1.96□□□□□ -2.1
VAPA-208ENST00000584796 C8orf44Q96CB5 159 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 SLC25A36Q96CQ1 311 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 ECHDC3Q96DC8 303 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 BPIFA2Q96DR5 249 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 COQ2Q96H96 371 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 COX14Q96I36 57 aa1.96□□□□□ -2.1
VAPA-208ENST00000584796 CELF6Q96J87 481 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms