RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DEAF1O75398 565 aaPredicted RBP13.51□□□□□ -0.25
SKA2-209ENST00000583976 NDUFB2O95178 105 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 TGFAP01135 160 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 PRKACGP22612 351 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 FPR3P25089 353 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 FASP25445 335 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 THBS4P35443 961 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 GSSP48637 474 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 DAP3P51398 398 aaKnown RBP13.51□□□□□ -0.25
SKA2-209ENST00000583976 ARF1P84077 181 aaKnown RBP13.51□□□□□ -0.25
SKA2-209ENST00000583976 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 TSPAN31Q12999 210 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 TRIP10Q15642 601 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 ANKDD1AQ495B1 522 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 ZNF770Q6IQ21 691 aaPredicted RBP13.51□□□□□ -0.25
SKA2-209ENST00000583976 THSD4Q6ZMP0 1018 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 C20orf196Q8IYI0 205 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 SYT14Q8NB59 555 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 ASB10Q8WXI3 467 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 ZNF566Q969W8 418 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 SNX18Q96RF0 628 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 TXNIPQ9H3M7 391 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 TPK1Q9H3S4 243 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 ADAM18Q9Y3Q7 739 aa13.51□□□□□ -0.25
SKA2-209ENST00000583976 IGHV2OR16-5A0A0B4J2B6 119 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 OR6C65A6NJZ3 312 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 LYNX1G3V0Z9 82 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 ENTPD5O75356 428 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 LYNX1P0DP58 116 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 DAOP14920 347 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 CSNK1A1P48729 337 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 CLRN1P58418 232 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 FXYD6P3P58550 94 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 RPL27P61353 136 aaKnown RBP13.5□□□□□ -0.25
SKA2-209ENST00000583976 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
SKA2-209ENST00000583976 TAF11Q15544 211 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 ATP6AP1Q15904 470 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 CEACAM16Q2WEN9 425 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 SMARCD3Q6STE5 483 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 MDP1Q86V88 176 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 NUP37Q8NFH4 326 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 FANK1Q8TC84 345 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 MAGEE2Q8TD90 523 aaPredicted RBP13.5□□□□□ -0.25
SKA2-209ENST00000583976 SLC25A44Q96H78 314 aaPredicted RBP13.5□□□□□ -0.25
SKA2-209ENST00000583976 SAMD8Q96LT4 415 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 TSPAN32Q96QS1 320 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 FEVQ99581 238 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 NIPSNAP1Q9BPW8 284 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 NDEL1Q9GZM8 345 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 SEMA6AQ9H2E6 1030 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 OR52D1Q9H346 318 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 CRLF2Q9HC73 371 aa13.5□□□□□ -0.25
SKA2-209ENST00000583976 MYOZ1Q9NP98 299 aaPredicted RBP13.5□□□□□ -0.25
SKA2-209ENST00000583976 TRMUO75648 421 aaKnown RBP13.49□□□□□ -0.25
SKA2-209ENST00000583976 IGHG1P01857 330 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 CD14P08571 375 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 ACADSP16219 412 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 HNF1AP20823 631 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 APEX1P27695 318 aaKnown RBP13.49□□□□□ -0.25
SKA2-209ENST00000583976 THBS2P35442 1172 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 SH3BGRP55822 239 aaPredicted RBP13.49□□□□□ -0.25
SKA2-209ENST00000583976 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 GK3PQ14409 553 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 RFX4Q33E94 735 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 LRR1Q96L50 414 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 Q96M85 177 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 ULBP2Q9BZM5 246 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 ZNF442Q9H7R0 627 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 DYNLRB1Q9NP97 96 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 B3GAT2Q9NPZ5 323 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 GRHPRQ9UBQ7 328 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
SKA2-209ENST00000583976 TMEM129A0AVI4 362 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 H3BNX3 289 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 LILRA1O75019 489 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 SOX14O95416 240 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 PPP1R3DO95685 299 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 PGA4P0DJD7 388 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 PGA3P0DJD8 388 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 FCGR1AP12314 374 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 CAPZA2P47755 286 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 C3orf36Q3SXR2 165 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 CLEC12AQ5QGZ9 265 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
SKA2-209ENST00000583976 ZNF620Q6ZNG0 422 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 OR4F15Q8NGB8 312 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 OR5K1Q8NHB7 308 aa13.48□□□□□ -0.25
SKA2-209ENST00000583976 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms