RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 GEMIN7Q9H840 131 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 ISYNA1Q9NPH2 558 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 GCNT4Q9P109 453 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 LGALS13Q9UHV8 139 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 KIAA1257Q9ULG3 409 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 VANGL2Q9ULK5 521 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 PRG3Q9Y2Y8 225 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 TMED5Q9Y3A6 229 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 KCNE3Q9Y6H6 103 aa2.41□□□□□ -2.02
SMCHD1-209ENST00000583441 IGHV3-66A0A0C4DH42 116 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CACNG3O60359 315 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 DPM1O60762 260 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 HUS1O60921 280 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 SRP72O76094 671 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 UTS2O95399 124 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 SERPINA5P05154 406 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CT45A6P0DMU7 189 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CT45A5P0DMU8 189 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CT45A7P0DMV0 189 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 FOLR1P15328 257 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 WARSP23381 471 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 GTF2E2P29084 291 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 HMOX2P30519 316 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 LONP1P36776 959 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CDKN1BP46527 198 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CRISP3P54108 245 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 LIPEQ05469 1076 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 QPRTQ15274 297 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 UBE2SQ16763 222 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 XKR4Q5GH76 650 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CT45A1Q5HYN5 189 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 IGFL2Q6UWQ7 119 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 LINC00173Q6ZV60 143 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 TMEM150AQ86TG1 271 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 GABRG1Q8N1C3 465 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CT45A3Q8NHU0 189 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 IL22RA2Q969J5 263 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 C8orf44Q96CB5 159 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 LRRC58Q96CX6 371 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 XPO6Q96QU8 1125 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 AUNIPQ9H7T9 357 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 ANKRA2Q9H9E1 313 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 LHX9Q9NQ69 397 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 FAM49BQ9NUQ9 324 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 RBAKQ9NYW8 714 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 MTCH1Q9NZJ7 389 aa2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 CCDC59Q9P031 241 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-209ENST00000583441 IGLV4-69A0A075B6H9 119 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 IGLV3-16A0A075B6K0 115 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 IGHV3-74A0A0B4J1X5 117 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 CIB4A0PJX0 185 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 INS-IGF2F8WCM5 200 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ERCC1P07992 297 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ACSM4P0C7M7 580 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ANXA8P13928 327 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 RAB3BP20337 219 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 STOMP27105 288 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 DCKP27707 260 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 CCR6P51684 374 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ZNF136P52737 540 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 UCNP55089 124 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 STXBP1P61764 594 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 SLC25A11Q02978 314 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 GINS1Q14691 196 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 OR7A5Q15622 319 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 KCTD19Q17RG1 926 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 HSDL1Q3SXM5 330 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 LY6G6FQ5SQ64 297 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 HES5Q5TA89 166 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ANXA8L1Q5VT79 327 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 TWF2Q6IBS0 349 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 CMC1Q7Z7K0 106 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 ZNF786Q8N393 782 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 STPG2Q8N412 459 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 COMMD1Q8N668 190 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 BBOF1Q8ND07 529 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 CCDC148Q8NFR7 591 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 MARCH1Q8TCQ1 289 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 WFIKKN1Q96NZ8 548 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 PANX1Q96RD7 426 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 NCOR1P1Q9H4R4 102 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 NTN4Q9HB63 628 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 KCNJ16Q9NPI9 418 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 C20orf96Q9NUD7 363 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 SAR1BQ9Y6B6 198 aa2.39□□□□□ -2.03
SMCHD1-209ENST00000583441 RLFQ13129 1914 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 A0A096LNJ9 63 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 KBTBD11-OT1A0A1B0GTJ5 212 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 TMX2-CTNND1H3BSU7 103 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 SCAMP2O15127 329 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 CD5LO43866 347 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 EIF4E2O60573 245 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 FKBP6O75344 327 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 SPAG7O75391 227 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 SLC25A14O95258 325 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 FABP3P05413 133 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 HOXC4P09017 264 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 ZNF250P15622 560 aa2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 GPX4P36969 197 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-209ENST00000583441 NAMPTP43490 491 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms