RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	FMOD	Q06828	376 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SGCA	Q16586	387 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IQCC	Q4KMZ1	466 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MTX3	Q5HYI7	312 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PABPC1L2A	Q5JQF8	200 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FGD3	Q5JSP0	725 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM209A	Q5JX71	171 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	C6orf52	Q5T4I8	152 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TBPL2	Q6SJ96	375 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ARL9	Q6T311	187 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM122B	Q7Z309	247 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LRRC18	Q8N456	261 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	UBASH3B	Q8TF42	649 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	HPS1	Q92902	700 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FOXN4	Q96NZ1	517 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CDRT15	Q96T59	188 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FUZ	Q9BT04	418 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MUC13	Q9H3R2	512 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IL1RAP	Q9NPH3	570 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	YAE1D1	Q9NRH1	226 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	NKIRAS2	Q9NYR9	191 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	EIF3K	Q9UBQ5	218 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CDC42EP3	Q9UKI2	254 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	AURKC	Q9UQB9	309 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MXRA5	Q9NR99	2828 aa		10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CHD3	Q12873	2000 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	YLPM1	P49750	1951 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SH3PXD2B	A1X283	911 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PRSS37	A4D1T9	235 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	KRT36	O76013	467 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TXNDC12	O95881	172 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGFBP1	P08833	259 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TACSTD2	P09758	323 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZNF32	P17041	273 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CDA	P32320	146 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GDI2	P50395	445 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ERVK-25	P63136	954 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MSMP	Q1L6U9	139 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PCGF3	Q3KNV8	242 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PGM2L1	Q6PCE3	622 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	DPY19L2P2	Q6ZN68	376 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGFN1	Q86VF2	1251 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LINC00471	Q8N535	108 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RNF148	Q8N7C7	305 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CPEB3	Q8NE35	698 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SYNPR	Q8TBG9	265 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	NSMAF	Q92636	917 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM46A	Q96IP4	442 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	POM121L2	Q96KW2	1035 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZNF570	Q96NI8	536 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CCT8L2	Q96SF2	557 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	OR2H1	Q9GZK4	316 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ARL8B	Q9NVJ2	186 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LPAR3	Q9UBY5	353 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CGGBP1	Q9UFW8	167 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	DUSP13	Q9UII6	198 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ADAM21	Q9UKJ8	722 aa		10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	NDRG4	Q9ULP0	352 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	5e-7	■■□□□ 13.4
CDK5RAP3-222	ENST00000581708	RTTN	Q86VV8	2226 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGKV1D-43	A0A0B4J1Z2	117 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TEX13C	A0A0J9YWL9	993 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TRBV4-1	A0A0J9YWV2	114 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708		A0A1W2PPW3	197 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	UNC119B	A6NIH7	251 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IMPA2	O14732	288 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ARPC2	O15144	300 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GADD45G	O95257	159 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM107A	O95990	144 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGHV3-13	P01766	116 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FABP3	P05413	133 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGHV4-31	P0DP07	118 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TCN1	P20061	433 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FPR3	P25089	353 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LAP3	P28838	519 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LIPA	P38571	399 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RPS6KA3	P51812	740 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CHN2	P52757	468 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GYS2	P54840	703 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TMEM33	P57088	247 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LSM6	P62312	80 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MXRA7	P84157	204 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PSG4	Q00888	419 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SCRN3	Q0VDG4	424 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RIN1	Q13671	783 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MEST	Q5EB52	335 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SMARCD3	Q6STE5	483 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	DEFB107A	Q8IZN7	70 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM86B1	Q8N7N1	296 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SNX33	Q8WV41	574 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RDH5	Q92781	318 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RSRC1	Q96IZ7	334 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708		Q96M85	177 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SYT3	Q9BQG1	590 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	BPESC1	Q9GZL8	116 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CHODL	Q9H9P2	273 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ELOVL3	Q9HB03	270 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	HINT3	Q9NQE9	182 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	POLE4	Q9NR33	117 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms