RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ST8SIA1Q92185 356 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 DOK1Q99704 481 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 PRSS27Q9BQR3 290 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 SMURF2Q9HAU4 748 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 C12orf10Q9HB07 376 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 USE1Q9NZ43 259 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 ORC6Q9Y5N6 252 aa9.25□□□□□ -0.93
TOP3A-210ENST00000580713 SPIN1Q9Y657 262 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-210ENST00000580713 KRT33AO76009 404 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 PNMTP11086 282 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 CBLP22681 906 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 FPR2P25090 351 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 IFNGR2P38484 337 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 RBM34P42696 430 aaKnown RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 HTR3AP46098 478 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 SLC16A1P53985 500 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 RAD23AP54725 363 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 UGT2B15P54855 530 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 KDM4DQ6B0I6 523 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 FAHD1Q6P587 224 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 ANKRD16Q6P6B7 361 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 TTC33Q6PID6 262 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 RBMS3Q6XE24 437 aaKnown RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 WDR88Q6ZMY6 472 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 MBOAT2Q6ZWT7 520 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 C1QL2Q7Z5L3 287 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 CDK20Q8IZL9 346 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 AQP11Q8NBQ7 271 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 TMEM239Q8WW34 195 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 C22orf15Q8WYQ4 148 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 FEVQ99581 238 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 ZNF184Q99676 751 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 ZNF556Q9HAH1 456 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 OBP2BQ9NPH6 170 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 KRCC1Q9NPI7 259 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 KRT84Q9NSB2 600 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 MED29Q9NX70 200 aa9.24□□□□□ -0.93
TOP3A-210ENST00000580713 SMPD3Q9NY59 655 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-210ENST00000580713 A0A087WUJ7 227 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 OR6C65A6NJZ3 312 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ETV2O00321 342 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 WNT9BO14905 357 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 PPIHO43447 177 aaKnown RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 PIP5K1CO60331 668 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 PMS2P2O95744 297 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 GASTP01350 101 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 CECR9P0C854 216 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ADRA2CP18825 462 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 CXCR1P25024 350 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TACR3P29371 465 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 CALCRP30988 508 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 HSPA13P48723 471 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 POLR2HP52434 150 aaKnown RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TUBA1BP68363 451 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TUBA4AP68366 448 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 MYBPC1Q00872 1141 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 HGFACQ04756 655 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 RFX4Q33E94 735 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ZNF770Q6IQ21 691 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TUBA1AQ71U36 451 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 GRINAQ7Z429 371 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ABHD12BQ7Z5M8 362 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 NRMQ8IXM6 262 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 NUP37Q8NFH4 326 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 DNAJC9Q8WXX5 260 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ARL5BQ96KC2 179 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 RDH12Q96NR8 316 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 DUX5Q96PT3 197 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ZNF426Q9BUY5 554 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 DGCR6LQ9BY27 220 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 ZNF442Q9H7R0 627 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 OSGIN1Q9UJX0 560 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 POFUT2Q9Y2G5 429 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 MED31Q9Y3C7 131 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 HDGFL3Q9Y3E1 203 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 CORINQ9Y5Q5 1042 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 FLVCR1Q9Y5Y0 555 aa9.23□□□□□ -0.93
TOP3A-210ENST00000580713 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
TOP3A-210ENST00000580713 TMED7-TICAM2A0A0A6YYA0 188 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 A0A0G2JMP0 313 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 A0A0X1KG70 313 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 TMEM129A0AVI4 362 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 KPNA4O00629 521 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-210ENST00000580713 DNPH1O43598 174 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 MITFO75030 526 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-210ENST00000580713 ALX3O95076 343 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 SNAP29O95721 258 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 IFI30P13284 250 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 CCNA2P20248 432 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 COL8A2P25067 703 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 APOBEC1P41238 236 aaKnown RBP9.22□□□□□ -0.93
TOP3A-210ENST00000580713 PRKCDQ05655 676 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 C11orf91Q3C1V1 193 aa9.22□□□□□ -0.93
TOP3A-210ENST00000580713 ZIK1Q3SY52 487 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms