RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 OR4A15Q8NGL6 344 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 DUSP26Q9BV47 211 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 IGKV1D-42A0A075B6H8 117 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 A0A087WUJ7 227 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 TMEM233B4DJY2 109 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 C11orf98E9PRG8 122 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 RAD51CO43502 376 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 FARS2O95363 451 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 PAHP00439 452 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 AHCYP23526 432 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 ARRB2P32121 409 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 LIPAP38571 399 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 PMELP40967 661 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 MELKQ14680 651 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 OR4F3Q6IEY1 312 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 OR5R1Q8NH85 324 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 COQ8BQ96D53 544 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 PAFAH2Q99487 392 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 GLTPQ9NZD2 209 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-213ENST00000580446 FRAS1Q86XX4 4008 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 CDHR4A6H8M9 788 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 HMGN4O00479 90 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 FCN3O75636 299 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 CPSF4O95639 269 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 PTHP01270 115 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 GATA4P43694 442 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 TAF11Q15544 211 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 ZDHHC24Q6UX98 284 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 CCDC121Q6ZUS5 278 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 FRMD7Q6ZUT3 714 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC22A9Q8IVM8 553 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 MIPOL1Q8TD10 442 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 OIT3Q8WWZ8 545 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 NSMAFQ92636 917 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 DPF1Q92782 380 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 METTL2AQ96IZ6 378 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 C3orf30Q96M34 536 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 PRR25Q96S07 402 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 ERP44Q9BS26 406 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 ONECUT1Q9UBC0 465 aa11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 CGGBP1Q9UFW8 167 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-213ENST00000580446 A0A096LPI6 279 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 LOC102725191A0A1B0GVB3 256 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 MEIOCA2RUB1 952 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 NPFFO15130 113 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 PEX11AO75192 247 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 GUSBP08236 651 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 QDPRP09417 244 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF26P17031 533 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF32P17041 273 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 CDAP32320 146 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 SAA4P35542 130 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 HTR5AP47898 357 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 FAM69AQ5T7M9 428 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 DCDC5Q6ZRR9 648 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 BOLLQ8N9W6 283 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 PNLDC1Q8NA58 520 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 WIPF2Q8TF74 440 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 TEX37Q96LM6 180 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 MOGAT1Q96PD6 335 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 DDOQ99489 341 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 DCTN5Q9BTE1 182 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 MEAF6Q9HAF1 191 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 A4GALTQ9NPC4 353 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 CHST2Q9Y4C5 530 aa11.45□□□□□ -0.58
CSNK1D-213ENST00000580446 NPHS1O60500 1241 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 AGR2O95994 175 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 DBIP07108 87 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 PSMB10P40306 273 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 ANXA11P50995 505 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 BMXP51813 675 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 GNA13Q14344 377 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 SFRP4Q6FHJ7 346 aaPredicted RBP11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 CREG2Q8IUH2 290 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 C10orf53Q8N6V4 93 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 CMBLQ96DG6 245 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 SSX3Q99909 188 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 NINJ2Q9NZG7 142 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 LSM4Q9Y4Z0 139 aaKnown RBP11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
CSNK1D-213ENST00000580446 TRAV36DV7A0A075B6V5 113 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 EXOC1LA0A1B0GW35 172 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 A0A1B0GW55 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 TMEM114B3SHH9 223 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms