RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NDUFAF7Q7L592 441 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ADGRG3Q86Y34 549 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ADAMTS18Q8TE60 1221 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 GPR137Q96N19 417 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 TRAF4Q9BUZ4 470 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-209ENST00000580095 C1QTNF6Q9BXI9 259 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 PRO3102Q9H379 93 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM185BQ9H7F4 350 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 EVA1AQ9H8M9 152 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 COA3Q9Y2R0 106 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-209ENST00000580095 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 IGHV1OR21-1A0A087WYE8 117 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 TRBV5-5A0A0J9YX44 114 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 CTDSPLO15194 276 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 SULT1B1O43704 296 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 SLC22A5O76082 557 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 RGS11O94810 467 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 BCKDHBP21953 392 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 DMRTC1Q5HYR2 192 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 HACD4Q5VWC8 232 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF767PQ75MW2 155 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 CDH26Q8IXH8 852 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 MED29Q9NX70 200 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 COPS7AQ9UBW8 275 aa9.44□□□□□ -0.9
TOP3A-209ENST00000580095 KIF26BQ2KJY2 2108 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 TRAV36DV7A0A075B6V5 113 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 TCRBV16S1A1N1A0A5B0 115 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 FITM1A5D6W6 292 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 H3BML4 177 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 TXNDC12O95881 172 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 S100A12P80511 92 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EXOSC2Q13868 293 aaKnown RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EIF2B1Q14232 305 aaKnown RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 C1orf140Q5VVS0 124 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 B3GNTL1Q67FW5 361 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 LRFN4Q6PJG9 635 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 CCDC36Q8IYA8 594 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 MEIOBQ8N635 442 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 LIPHQ8WWY8 451 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 NKD1Q969G9 470 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EMC6Q9BV81 110 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 CHST6Q9GZX3 395 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SLC2A4RGQ9NR83 387 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 FGF21Q9NSA1 209 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 GLTPQ9NZD2 209 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 KLF2Q9Y5W3 355 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 TMEM131Q92545 1883 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SDK2Q58EX2 2172 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 FER1L5A0AVI2 2057 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 IGKV1D-43A0A0B4J1Z2 117 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 ST8SIA5O15466 376 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 TSPAN2O60636 221 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 GLSO94925 669 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 PDGFAP04085 211 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 VSIG10L2P0DP72 767 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 APEHP13798 732 aaKnown RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 FOXK1P85037 733 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SPOCK1Q08629 439 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SLC17A1Q14916 467 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 INPP5JQ15735 1006 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 GRK1Q15835 563 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 COL28A1Q2UY09 1125 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 C2orf76Q3KRA6 126 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 BAIAP2L2Q6UXY1 529 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SLC29A4Q7RTT9 530 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 MAMDC2Q7Z304 686 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF227Q86WZ6 799 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 SLC25A45Q8N413 288 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 OR4C16Q8NGL9 310 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 OR5M1Q8NGP8 315 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 DCBLD2Q96PD2 775 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 ABHD6Q9BV23 337 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 ATG5Q9H1Y0 275 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EXOSC3Q9NQT5 275 aaKnown RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 FSCN3Q9NQT6 498 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 MED11Q9P086 117 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 EMC3Q9P0I2 261 aa9.43□□□□□ -0.9
TOP3A-209ENST00000580095 RPH3AQ9Y2J0 694 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-209ENST00000580095 A0A1B0GVI7 797 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 BLACEA4D250 179 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ACOT7O00154 380 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CTAG2O75638 210 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CSN2P05814 226 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CD1AP06126 327 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 TPOP07202 933 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF250P15622 560 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 MAPK3P27361 379 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 LCN1P31025 176 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 RPL27P61353 136 aaKnown RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 HNRNPKP61978 463 aaKnown RBP eCLIP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 OR7A5Q15622 319 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 CSRP2Q16527 193 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF782Q6ZMW2 699 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-209ENST00000580095 FGD2Q7Z6J4 655 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 OR51S1Q8NGJ8 323 aa9.42□□□□□ -0.9
TOP3A-209ENST00000580095 PHYHIPQ92561 330 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms