RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ETFDHQ16134 617 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PGGHGQ32M88 737 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC36A3Q495N2 470 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM201Q5SNT2 666 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OGFRL1Q5TC84 451 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST2H3PS2Q5TEC6 136 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 LINC01590Q5TEZ4 76 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLX4IPQ5VYV7 408 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 C12orf73Q69YU5 71 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GTF2IRD2BQ6EKJ0 949 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM225Q6GV28 225 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ACSM5Q6NUN0 579 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 NIPAL3Q6P499 406 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CASP12Q6UXS9 341 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 DPY19L2P2Q6ZN68 376 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST2H3AQ71DI3 136 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CHMP1BQ7LBR1 199 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GPAT4Q86UL3 456 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GTF2IRD2Q86UP8 949 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ZBTB46Q86UZ6 589 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GLCCI1Q86VQ1 547 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF584Q8IVC4 421 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 IQCF1Q8N6M8 205 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 C1orf162Q8NEQ5 155 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OR1K1Q8NGR3 316 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 FANK1Q8TC84 345 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MAGEE2Q8TD90 523 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CA5BP1Q8WTZ4 195 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 NRG4Q8WWG1 115 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 HTRA1Q92743 480 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MCHR2Q969V1 340 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 APH1AQ96BI3 265 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 S100PBPQ96BU1 408 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A44Q96H78 314 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ADAD1Q96M93 576 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 WFIKKN1Q96NZ8 548 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TSSK2Q96PF2 358 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 RAB3IPQ96QF0 476 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PITX2Q99697 317 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CIB1Q99828 191 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ALG12Q9BV10 488 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 RBM4Q9BWF3 364 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 RBM24Q9BX46 236 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PRRG4Q9BZD6 226 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SEMA6AQ9H2E6 1030 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MARCH7Q9H992 704 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SEC61A2Q9H9S3 476 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 KCNJ16Q9NPI9 418 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC17A5Q9NRA2 495 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CMC2Q9NRP2 79 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ELOVL5Q9NYP7 299 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TAS2R16Q9NYV7 291 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GLTPQ9NZD2 209 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 COQ3Q9NZJ6 369 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 EMC3Q9P0I2 261 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PDP1Q9P0J1 537 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CRNNQ9UBG3 495 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PLEKHB1Q9UF11 243 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PROCRQ9UNN8 238 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A15Q9Y619 301 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CSMD1Q96PZ7 3565 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ARID1AO14497 2285 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OTOGQ6ZRI0 2925 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DYSFO75923 2080 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 NAV2Q8IVL1 2488 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF469Q96JG9 3925 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PRSS37A4D1T9 235 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CCDC182A6NF36 153 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 OR6C65A6NJZ3 312 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SAC3D1A6NKF1 404 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF99A8MXY4 864 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PRR32B1ATL7 298 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PRSS44E7EML9 344 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 G3V2T6 193 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 C16orf97H3BN30 126 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 M0R129 80 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 EI24O14681 340 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SURF4O15260 269 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DHHO43323 396 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RNF13O43567 381 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 IDH3BO43837 385 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 AHCYL1O43865 530 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ICMTO60725 284 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC43A1O75387 559 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RAD51DO75771 328 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SERPINI2O75830 405 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SEC14L2O76054 403 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GPANK1O95872 356 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 BCL10O95999 233 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 IGKV3-15P01624 115 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TFP02787 698 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 HRGP04196 525 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CLUP10909 449 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FCGR1AP12314 374 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms