RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PITPNBP48739 271 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 CD97P48960 835 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 DNASE1L1P49184 302 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 CLDN17P56750 224 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 RPS11P62280 158 aaKnown RBP eCLIP9.93□□□□□ -0.82
SKA2-204ENST00000578519 LSM6P62312 80 aaKnown RBP9.93□□□□□ -0.82
SKA2-204ENST00000578519 Q0VFX4 171 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 ASAH1Q13510 395 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 INPP5JQ15735 1006 aaPredicted RBP9.93□□□□□ -0.82
SKA2-204ENST00000578519 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 AGAP7PQ5VUJ5 663 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 SLC25A47Q6Q0C1 308 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 DCXRQ7Z4W1 244 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 MDGA2Q7Z553 956 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.93□□□□□ -0.82
SKA2-204ENST00000578519 Q8N402 240 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 SAMD12Q8N8I0 201 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 FAM83FQ8NEG4 500 aaPredicted RBP9.93□□□□□ -0.82
SKA2-204ENST00000578519 OR5M1Q8NGP8 315 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 RAB40AQ8WXH6 277 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 DCLRE1CQ96SD1 692 aaKnown RBP9.93□□□□□ -0.82
SKA2-204ENST00000578519 NPAS1Q99742 590 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 SOSTQ9BQB4 213 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 SEC61A2Q9H9S3 476 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 BRD7Q9NPI1 651 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 GLTPQ9NZD2 209 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 B3GAT1Q9P2W7 334 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 HHLA2Q9UM44 414 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 GTF2A1LQ9UNN4 478 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 FOXJ3Q9UPW0 622 aa9.93□□□□□ -0.82
SKA2-204ENST00000578519 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 XIRP2A4UGR9 3374 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 SMIM30A4D0T7 59 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 ACOD1A6NK06 481 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 AIPO00170 330 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 SULT1B1O43704 296 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 WISP1O95388 367 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 HNRNPCP07910 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
SKA2-204ENST00000578519 QDPRP09417 244 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CD46P15529 392 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 POU3F2P20265 443 aaPredicted RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 CSRP1P21291 193 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 ACHEP22303 614 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 HSD11B1P28845 292 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 P2RY4P51582 365 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 NANOS3P60323 173 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 GRB2P62993 217 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 GABREP78334 506 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 MRPS10P82664 201 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 H3F3AP84243 136 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CAMK2DQ13557 499 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 INSL4Q14641 139 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 UBE2NLQ5JXB2 153 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 B3GNTL1Q67FW5 361 aaPredicted RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 GLT8D1Q68CQ7 371 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 NHLRC1Q6VVB1 395 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 LUZP2Q86TE4 346 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 ZNF227Q86WZ6 799 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CATSPERDQ86XM0 798 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 ZNF433Q8N7K0 673 aaPredicted RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 CCDC54Q8NEL0 328 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 DEFB124Q8NES8 71 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 OR2V1Q8NHB1 315 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 RNF133Q8WVZ7 376 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 C11orf40Q8WZ69 217 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 NKD1Q969G9 470 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 MCHR2Q969V1 340 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CPNE4Q96A23 557 aaPredicted RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 FOXRED1Q96CU9 486 aaPredicted RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 S100A16Q96FQ6 103 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 EMC6Q9BV81 110 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 HDHD2Q9H0R4 259 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 PPP1R3EQ9H7J1 279 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CENPMQ9NSP4 180 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 ETAA1Q9NY74 926 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 CAMK2AQ9UQM7 478 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 RCE1Q9Y256 329 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 KLHDC2Q9Y2U9 406 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 AK6Q9Y3D8 172 aaKnown RBP9.92□□□□□ -0.82
SKA2-204ENST00000578519 LRP12Q9Y561 859 aa9.92□□□□□ -0.82
SKA2-204ENST00000578519 TRBV5-7A0A0A0MS05 114 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 TMEM269A0A1B0GVZ9 245 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 SHISA3A0PJX4 238 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 IFITM5A6NNB3 132 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 B4DXG7 233 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 ZNF878C9JN71 531 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 G3V3Y1 287 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 SLC43A1O75387 559 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 UBL3O95164 117 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 OPN1LWP04000 364 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 ISG15P05161 165 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 ELK1P19419 428 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 CD96P40200 585 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 MMP16P51512 607 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 PLGLB1Q02325 96 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 TAB1Q15750 504 aa9.91□□□□□ -0.82
SKA2-204ENST00000578519 ZNF79Q15937 498 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms