RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RAB1BQ9H0U4 201 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 RAD21L1Q9H4I0 556 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ARMC7Q9H6L4 198 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ZNF442Q9H7R0 627 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TCF7L1Q9HCS4 588 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 DYNLRB1Q9NP97 96 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TCF7L2Q9NQB0 619 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 TMEM140Q9NV12 185 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 THUMPD1Q9NXG2 353 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 B3GNT2Q9NY97 397 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 ZNF224Q9NZL3 707 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 MYEF2Q9P2K5 600 aaKnown RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 LPAR3Q9UBY5 353 aa5.35□□□□□ -1.55
NUP88-212ENST00000576708 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
NUP88-212ENST00000576708 A0A0B4J2E0 115 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 A0A1B0GX12 115 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 CPSF4LA6NMK7 179 aaKnown RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 VSTM5A8MXK1 200 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ZNF99A8MXY4 864 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 C11orf98E9PRG8 122 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 PLPP3O14495 311 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 WNT9BO14905 357 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 POLR3GO15318 223 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 OR2T1O43869 369 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 PDE5AO76074 875 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 THY1P04216 161 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ETS2P15036 469 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 B4GALT1P15291 398 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ZNF14P17017 642 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 ZNF20P17024 532 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 AHCYP23526 432 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 COL8A2P25067 703 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ARR3P36575 388 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ALDH3B1P43353 468 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 PTDSS1P48651 473 aaKnown RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 RAP2BP61225 183 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 FADDQ13158 208 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 PMS2P3Q13401 168 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 CCNIQ14094 377 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 MELKQ14680 651 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 RAB39AQ14964 217 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 MFSD13AQ14CX5 517 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 NPTX1Q15818 432 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 GSG1Q2KHT4 349 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ALKBH6Q3KRA9 238 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 BEND6Q5SZJ8 279 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 ULK3Q6PHR2 472 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 DLEU7Q6UYE1 221 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 KRT73Q86Y46 540 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 PTOV1Q86YD1 416 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ZNF786Q8N393 782 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 LRRC17Q8N6Y2 441 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 GPR32P1Q8NGA4 272 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 OR6N1Q8NGY5 312 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 DNAJA4Q8WW22 397 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 NEU4Q8WWR8 484 aaPredicted RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 SLC35B4Q969S0 331 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 SLC47A1Q96FL8 570 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 SLC41A3Q96GZ6 507 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ZNF75AQ96N20 296 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 MCHR1Q99705 422 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 ULBP2Q9BZM5 246 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 NARFLQ9H6Q4 476 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 C12orf10Q9HB07 376 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 TMEM27Q9HBJ8 222 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 TESQ9UGI8 421 aaKnown RBP5.34□□□□□ -1.55
NUP88-212ENST00000576708 USP22Q9UPT9 525 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 POFUT2Q9Y2G5 429 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 CMAHPQ9Y471 501 aa5.34□□□□□ -1.55
NUP88-212ENST00000576708 MALRD1Q5VYJ5 2156 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 LOC102725191A0A1B0GVB3 256 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ZNF726A6NNF4 738 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 M0QX08 132 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 KPNA4O00629 521 aaPredicted RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 MFN2O95140 757 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 LYPD3O95274 346 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 CH25HO95992 272 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 TACSTD2P09758 323 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ADORA3P0DMS8 318 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 CCL2P13500 99 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ZNF35P13682 527 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 GPX2P18283 190 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 NR4A1P22736 598 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 SLC6A2P23975 617 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 GIFP27352 417 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 CSNK1A1P48729 337 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 MRPL19P49406 292 aaKnown RBP5.33□□□□□ -1.56
NUP88-212ENST00000576708 CHN2P52757 468 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 PTTG1IPP53801 180 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 BIDP55957 195 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 MTPNP58546 118 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 NCALDP61601 193 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 RAB1AP62820 205 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 PUDPQ08623 228 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 DUSP7Q16829 419 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 RUNDC3AQ59EK9 446 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 TTMPQ5BVD1 217 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ENTPD8Q5MY95 495 aa5.33□□□□□ -1.56
NUP88-212ENST00000576708 ELFN2Q5R3F8 820 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms