RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 AMDHD2Q9Y303 409 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SLC25A15Q9Y619 301 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 OTOGQ6ZRI0 2925 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 CSMD1Q96PZ7 3565 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 ARPC4-TTLL3A0A0A6YYG9 625 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 LOC100130705A0A1B0GUX0 176 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 CASKO14936 926 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 SLC16A6O15403 523 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 TLX2O43763 284 aaPredicted RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 HLA-HP01893 362 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 GAAP10253 952 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 EPXP11678 715 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 HOXB1P14653 301 aaPredicted RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 SPI1P17947 270 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 NPR2P20594 1047 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 HOXC12P31275 282 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 GUCA1AP43080 201 aaPredicted RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 PTDSS1P48651 473 aaKnown RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 HSF2Q03933 536 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PIGFQ07326 219 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PPA1Q15181 289 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 MEP1BQ16820 701 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 NRN1LQ496H8 165 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 KLHL12Q53G59 568 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 FAM27BQ5VT28 67 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 FBXW10Q5XX13 1052 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 CXXC5Q7LFL8 322 aaKnown RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 BCDIN3DQ7Z5W3 292 aaKnown RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 GLB1L2Q8IW92 636 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 DHRSXQ8N5I4 330 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PROKR2Q8NFJ6 384 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 BBS1Q8NFJ9 593 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 FAM81AQ8TBF8 368 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 TMEM163Q8TC26 289 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 C11orf40Q8WZ69 217 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 HSD17B8Q92506 261 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 MUCL1Q96DR8 90 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 IL4I1Q96RQ9 567 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PITX2Q99697 317 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 C1QTNF6Q9BXI9 259 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 PRRG3Q9BZD7 231 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 SIAEQ9HAT2 523 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 NOX3Q9HBY0 568 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 CELSR2Q9HCU4 2923 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 EMC7Q9NPA0 242 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 OBP2BQ9NPH6 170 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 ZNF226Q9NYT6 803 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 ZNF224Q9NZL3 707 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 NDRG4Q9ULP0 352 aaKnown RBP7.48□□□□□ -1.21
NUP88-211ENST00000575976 GMPPBQ9Y5P6 360 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
NUP88-211ENST00000575976 TVP23AA6NH52 213 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 GLCEO94923 617 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 FARS2O95363 451 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 CLIC3O95833 236 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 WNT11O96014 354 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 HLA-DQA2P01906 255 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 TFP02787 698 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CST2P09228 141 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CD79AP11912 226 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 COX6B1P14854 86 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 MSR1P21757 451 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 SLC2A5P22732 501 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CRYGSP22914 178 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CAPZA2P47755 286 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 ZNF83P51522 516 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CDC42P60953 191 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 RAB1AP62820 205 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 ADARB1P78563 741 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 TEKQ02763 1124 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 GLO1Q04760 184 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 APOFQ13790 326 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 KEAP1Q14145 624 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 ENDOGQ14249 297 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 LINC01590Q5TEZ4 76 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 AADACL4Q5VUY2 407 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 B3GLCTQ6Y288 498 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 SLC16A14Q7RTX9 510 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 MDP1Q86V88 176 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CCDC36Q8IYA8 594 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 ZNF511Q8NB15 262 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 ZNF555Q8NEP9 628 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 SLC26A10Q8NG04 563 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 OR8J1Q8NGP2 316 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 OR6K6Q8NGW6 343 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 FAM222BQ8WU58 562 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 TRUB1Q8WWH5 349 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 CYGBQ8WWM9 190 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 FBXO17Q96EF6 278 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 VCXQ9H320 206 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 RNF121Q9H920 327 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 MRPL22Q9NWU5 206 aaKnown RBP7.47□□□□□ -1.21
NUP88-211ENST00000575976 IMPAD1Q9NX62 359 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms