RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 C11orf40Q8WZ69 217 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 MUL1Q969V5 352 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 UPB1Q9UBR1 384 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 MRPS14O60783 128 aaKnown RBP21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 SEC14L2O76054 403 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 EMX1Q04741 257 aaPredicted RBP21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 PMPCAQ10713 525 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 FAPQ12884 760 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 TFAP2EQ6VUC0 442 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 NCCRP1Q6ZVX7 275 aaPredicted RBP21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 LHFPL3Q86UP9 236 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 OR6K3Q8NGY3 331 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 CDCA4Q9BXL8 241 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 EMC7Q9NPA0 242 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF587BE7ETH6 402 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 MYL12AP19105 171 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 C9orf135Q5VTT2 229 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 ACBD7Q8N6N7 88 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 ISOC1Q96CN7 298 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 TTTY10Q9BZA0 68 aa21.18■□□□□ 0.98
ATPAF1-213ENST00000574428 RP1L1Q8IWN7 2480 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 TRGV8A0A0C4DH27 118 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 A0A1W2PQL4 384 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF593O00488 134 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 SPARCP09486 303 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF823P16415 610 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 CEACAM8P31997 349 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 ENTPD1P49961 510 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 FOXG1P55316 489 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 IRF3Q14653 427 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 SGCAQ16586 387 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 GPR107Q5VW38 600 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 FBXW9Q5XUX1 488 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 DPY19L4Q7Z388 723 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 BTLAQ7Z6A9 289 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 ZFP3Q96NJ6 502 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 POLE4Q9NR33 117 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 MALT1Q9UDY8 824 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 COPS3Q9UNS2 423 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 KLHDC2Q9Y2U9 406 aa21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 EXOSC1Q9Y3B2 195 aaKnown RBP21.17■□□□□ 0.98
ATPAF1-213ENST00000574428 DAPL1A0PJW8 107 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 HRGP04196 525 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 LIMS3P0CW19 117 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 LIMS4P0CW20 117 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 ACTC1P68032 377 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 ACTA1P68133 377 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 FOXL2NBQ6ZUU3 175 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 NABP1Q96AH0 204 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 STARD4Q96DR4 205 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 BBC3Q96PG8 261 aaPredicted RBP21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 JAM3Q9BX67 310 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 ERVK13-1Q9NX77 482 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 PTTG2Q9NZH5 202 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 KCNG2Q9UJ96 466 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 OSGIN2Q9Y236 505 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 FREM1Q5H8C1 2179 aa21.16■□□□□ 0.98
ATPAF1-213ENST00000574428 CRHP06850 196 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 OR2T7P0C7T2 308 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 MRPL49Q13405 166 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 EIF2S3LQ2VIR3 472 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 SSX6Q7RTT6 188 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 CDC20BQ86Y33 519 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 SVOPQ8N4V2 548 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 OR10H5Q8NGA6 315 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 OR2T27Q8NH04 317 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF649Q9BS31 505 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 TMEM38BQ9NVV0 291 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 RPL36A-HNRNPH2H7BZ11 118 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF701M0R085 212 aaPredicted RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 INMTO95050 263 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 PTHP01270 115 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 B4GALT1P15291 398 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 CD79BP40259 229 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 GUCA1AP43080 201 aaPredicted RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 CASP6P55212 293 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 GP2P55259 537 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF85Q03923 595 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 LINC00346Q8IVM7 164 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 FOXB1Q99853 325 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 NAA50Q9GZZ1 169 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 NELFAQ9H3P2 528 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 ACOT13Q9NPJ3 140 aa21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 CHCHD3Q9NX63 227 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF99A8MXY4 864 aaPredicted RBP21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 MSR1P21757 451 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 MRPS34P82930 218 aaKnown RBP21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 KCNMB1Q16558 191 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 ATCAYQ86WG3 371 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 OTOSQ8NHW6 89 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF420Q8TAQ5 688 aaPredicted RBP21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 ALG8Q9BVK2 526 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 INPP5EQ9NRR6 644 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 LAMP5Q9UJQ1 280 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 PROCRQ9UNN8 238 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 ERGIC3Q9Y282 383 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 POLR1DQ9Y2S0 133 aa21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 PHF3Q92576 2039 aaKnown RBP21.14■□□□□ 0.97
ATPAF1-213ENST00000574428 A0A0G2JNJ9 132 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 MYL12BO14950 172 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms