RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 NDUFS8O00217 210 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 DYNC1I1O14576 645 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 IMPA2O14732 288 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 NDUFB2O95178 105 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 GADD45GO95257 159 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 STAMBPO95630 424 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 CLPTM1O96005 669 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 SCG5P05408 212 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 FABP3P05413 133 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 NAT2P11245 290 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 STOMP27105 288 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 EVX1P49640 407 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 PSG4Q00888 419 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 KRR1Q13601 381 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 FAM27BQ5VT28 67 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 UGT2A3Q6UWM9 527 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 FAM122BQ7Z309 247 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 PRIMA1Q86XR5 153 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 FNDC8Q8TC99 324 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 UBASH3BQ8TF42 649 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 DHRS1Q96LJ7 313 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 MYOZ1Q9NP98 299 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 EMC7Q9NPA0 242 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 IER3IP1Q9Y5U9 82 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 C5orf49A4QMS7 147 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 A8MV72 311 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 SOCS2O14508 198 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 TLX2O43763 284 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 PTP4A3O75365 173 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 CRLF1O75462 422 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 IGHV4-31P0DP07 118 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF16P17020 682 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 RRM2P31350 389 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 UCP2P55851 309 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 FXYD6P3P58550 94 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 GLO1Q04760 184 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 ENDOGQ14249 297 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 NKPD1Q17RQ9 610 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 SPATA46Q5T0L3 261 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 C6orf52Q5T4I8 152 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 CCDC197Q8NCU1 140 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 OR1J1Q8NGS3 322 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 NSL1Q96IY1 281 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 FUZQ9BT04 418 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF416Q9BWM5 594 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 OR2H1Q9GZK4 316 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 WNT5BQ9H1J7 359 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 POLE4Q9NR33 117 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 TAAR3PQ9P1P4 343 aa15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 MAP1AP78559 2803 aaPredicted RBP15.26■□□□□ 0.03
CTDNEP1-207ENST00000572043 LOC100509620A0A075B734 347 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 PRSS37A4D1T9 235 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 LRP5LA4QPB2 252 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 OR10H3O60404 316 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 PPP1R3DO95685 299 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 SNAP29O95721 258 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 FAM107AO95990 144 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 CST2P09228 141 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 APEHP13798 732 aaKnown RBP15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 CTLA4P16410 223 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 ATP6V1B2P21281 511 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 MSR1P21757 451 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 RAD52P43351 418 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 GDI2P50395 445 aaKnown RBP15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 MNAT1P51948 309 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 SMIM11AP58511 58 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 CYB5R2Q6BCY4 276 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF774Q6NX45 483 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 RINLQ6ZS11 566 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZER1Q7Z7L7 766 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZDHHC21Q8IVQ6 265 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 SYNPRQ8TBG9 265 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 C11orf40Q8WZ69 217 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 POM121L2Q96KW2 1035 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 SYT4Q9H2B2 425 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 MS4A5Q9H3V2 200 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 NRIP3Q9NQ35 241 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 TIMM10BQ9Y5J6 103 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 ALPK2Q86TB3 2170 aa15.25■□□□□ 0.03
CTDNEP1-207ENST00000572043 SLC16A7O60669 478 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 HPXP02790 462 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 SDHAP31040 664 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 WNT5AP41221 380 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 KLF3P57682 345 aaPredicted RBP15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 SELENOVP59797 346 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 PCBD1P61457 104 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 FOXL2NBQ6ZUU3 175 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF101Q8IZC7 436 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 FANK1Q8TC84 345 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 GTF3AQ92664 365 aaKnown RBP15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 BCL2L14Q9BZR8 327 aa15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 HEATR1Q9H583 2144 aaKnown RBP15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 EIF3KQ9UBQ5 218 aaKnown RBP15.24■□□□□ 0.03
CTDNEP1-207ENST00000572043 C12orf71A8MTZ7 269 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 KIAA1324LA8MWY0 1029 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 MPZL1O95297 269 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 MAGEB1P43366 347 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 CENPAP49450 140 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 RPS6KA3P51812 740 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms