RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TLN1Q9Y490 2541 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 MED13Q9UHV7 2174 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 TRGV5A0A0B4J1U4 118 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 G3V3Y1 287 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 UPK1AO00322 258 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 EMC8O43402 210 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CDC40O60508 579 aaKnown RBP eCLIP3.34□□□□□ -1.87
NUP88-202ENST00000570937 SNNO75324 88 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 CBR3O75828 277 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GLSO94925 669 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 TGDSO95455 350 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 DUS4LO95620 317 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 CLDN1O95832 211 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CLPSP04118 112 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 IL6P05231 212 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ABCB1P08183 1280 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 ALOX5P09917 674 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CT62P0C5K7 136 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CT45A8P0DMV1 189 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CT45A9P0DMV2 189 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CCL3P10147 92 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GABRA1P14867 456 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 IDO1P14902 403 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 H2AFXP16104 143 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 ATP6V1C1P21283 382 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GDF1P27539 372 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 LCN1P31025 176 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 S100A3P33764 101 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GABRA3P34903 492 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 PTGER4P35408 488 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CASP3P42574 277 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CA7P43166 264 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 MAGEA5P43359 124 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 UQCRFS1P47985 274 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 DNASE1L1P49184 302 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CCT3P49368 545 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 TDGF1P3P51864 188 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 PAX9P55771 341 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CLDN8P56748 225 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 FBXW4P57775 412 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 KCNK10P57789 538 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 STX1BP61266 288 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 C17orf67Q0P5P2 114 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 PDE7AQ13946 482 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 LTB4RQ15722 352 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CT45A2Q5DJT8 189 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ENPP6Q6UWR7 440 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 TMEM64Q6YI46 380 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 BTN2A1Q7KYR7 527 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 LRRTM1Q86UE6 522 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ARFGAP2Q8N6H7 521 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 TRIML2Q8N7C3 387 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR7G2Q8NG99 324 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR7A2PQ8NGA2 310 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR10G3Q8NGC4 313 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR1J4Q8NGS1 313 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CLHC1Q8NHS4 586 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 FAM57AQ8TBR7 257 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 SPPL2AQ8TCT8 520 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GPR151Q8TDV0 419 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 DOK4Q8TEW6 326 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CA5BP1Q8WTZ4 195 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 SMAP2Q8WU79 429 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 GATAD1Q8WUU5 269 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 OR5P2Q8WZ92 322 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ZNF75CPQ92670 426 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 ITFG2Q969R8 447 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 TMBIM1Q969X1 311 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CIDECQ96AQ7 238 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 OMA1Q96E52 524 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CHMP6Q96FZ7 201 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 PPP1R36Q96LQ0 422 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 VSTM2LQ96N03 204 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 RILPQ96NA2 401 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 MS4A4EQ96PG1 132 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 STACQ99469 402 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 SORT1Q99523 831 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CCDC106Q9BWC9 280 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ANGPTL4Q9BY76 406 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 HES7Q9BYE0 225 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 TBL1XR1Q9BZK7 514 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 NXF5Q9H1B4 397 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 DEFB127Q9H1M4 99 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 RABEP2Q9H5N1 569 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 RMND5AQ9H871 391 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ZDHHC11Q9H8X9 412 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 FOLH1BQ9HBA9 442 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 SH2D2AQ9NP31 389 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ZCCHC3Q9NUD5 404 aaKnown RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 MRGBPQ9NV56 204 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 GIN1Q9NXP7 522 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 RPS6KA6Q9UK32 745 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ABCG2Q9UNQ0 655 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 ZNF835Q9Y2P0 537 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 CHCHD2Q9Y6H1 151 aaPredicted RBP3.34□□□□□ -1.87
NUP88-202ENST00000570937 TNRC6AQ8NDV7 1962 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms