RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CD63P08962 238 aa14.01□□□□□ -0.17
CIITA-204ENST00000570546 EN2P19622 333 aaPredicted RBP14.01□□□□□ -0.17
CIITA-204ENST00000570546 FGF9P31371 208 aaPredicted RBP14.01□□□□□ -0.17
CIITA-204ENST00000570546 DBPQ10586 325 aaPredicted RBP14.01□□□□□ -0.17
CIITA-204ENST00000570546 RHBDD1Q8TEB9 315 aa14.01□□□□□ -0.17
CIITA-204ENST00000570546 HAS2Q92819 552 aa14.01□□□□□ -0.17
CIITA-204ENST00000570546 TRIP11Q15643 1979 aa14.01□□□□□ -0.17
CIITA-204ENST00000570546 ALOX12BO75342 701 aa14□□□□□ -0.17
CIITA-204ENST00000570546 PIGTQ969N2 578 aa14□□□□□ -0.17
CIITA-204ENST00000570546 ORAI1Q96D31 301 aa14□□□□□ -0.17
CIITA-204ENST00000570546 EXOSC3Q9NQT5 275 aaKnown RBP14□□□□□ -0.17
CIITA-204ENST00000570546 AGAP14A8MT82 685 aa14□□□□□ -0.17
CIITA-204ENST00000570546 G3V3Y1 287 aa14□□□□□ -0.17
CIITA-204ENST00000570546 ITGB2P05107 769 aa14□□□□□ -0.17
CIITA-204ENST00000570546 RFX2P48378 723 aa14□□□□□ -0.17
CIITA-204ENST00000570546 HSF1Q00613 529 aa14□□□□□ -0.17
CIITA-204ENST00000570546 TAGLNQ01995 201 aaKnown RBP14□□□□□ -0.17
CIITA-204ENST00000570546 PRTGQ2VWP7 1150 aa14□□□□□ -0.17
CIITA-204ENST00000570546 KIRREL2Q6UWL6 708 aa14□□□□□ -0.17
CIITA-204ENST00000570546 OR5L1Q8NGL2 311 aa14□□□□□ -0.17
CIITA-204ENST00000570546 SLAMF7Q9NQ25 335 aa14□□□□□ -0.17
CIITA-204ENST00000570546 CHRNA9Q9UGM1 479 aa14□□□□□ -0.17
CIITA-204ENST00000570546 CHRM2P08172 466 aa14□□□□□ -0.17
CIITA-204ENST00000570546 SLC2A1P11166 492 aa14□□□□□ -0.17
CIITA-204ENST00000570546 MMP15P51511 669 aa14□□□□□ -0.17
CIITA-204ENST00000570546 IAH1Q2TAA2 248 aaPredicted RBP14□□□□□ -0.17
CIITA-204ENST00000570546 AMER3Q8N944 861 aa14□□□□□ -0.17
CIITA-204ENST00000570546 PSMF1Q92530 271 aa14□□□□□ -0.17
CIITA-204ENST00000570546 GPATCH2Q9NW75 528 aa14□□□□□ -0.17
CIITA-204ENST00000570546 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
CIITA-204ENST00000570546 DSCR3O14972 297 aa14□□□□□ -0.17
CIITA-204ENST00000570546 EXOSC2Q13868 293 aaKnown RBP14□□□□□ -0.17
CIITA-204ENST00000570546 LPAL2Q16609 132 aa14□□□□□ -0.17
CIITA-204ENST00000570546 OR1M1Q8NGA1 313 aa14□□□□□ -0.17
CIITA-204ENST00000570546 BANF2Q9H503 90 aa14□□□□□ -0.17
CIITA-204ENST00000570546 CHST11Q9NPF2 352 aa14□□□□□ -0.17
CIITA-204ENST00000570546 TMEM184BQ9Y519 407 aaPredicted RBP14□□□□□ -0.17
CIITA-204ENST00000570546 EIF1BO60739 113 aaKnown RBP14□□□□□ -0.17
CIITA-204ENST00000570546 IL32P24001 234 aa14□□□□□ -0.17
CIITA-204ENST00000570546 MALSU1Q96EH3 234 aa14□□□□□ -0.17
CIITA-204ENST00000570546 LRRC46Q96FV0 321 aa14□□□□□ -0.17
CIITA-204ENST00000570546 ZNF416Q9BWM5 594 aa14□□□□□ -0.17
CIITA-204ENST00000570546 PIGLQ9Y2B2 252 aa14□□□□□ -0.17
CIITA-204ENST00000570546 GPR171O14626 319 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 PRKNO60260 465 aaPredicted RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 WISP3O95389 354 aaPredicted RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 IRF2P14316 349 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 RPS27P42677 84 aaKnown RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 IDH3GP51553 393 aaPredicted RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 ERVK-16P61578 105 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 C2orf76Q3KRA6 126 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 TMEM215Q68D42 235 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 EMC6Q9BV81 110 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 CYSLTR2Q9NS75 346 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 ACAD8Q9UKU7 415 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 BOKQ9UMX3 212 aaPredicted RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 SBF2Q86WG5 1849 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 UBE2MP61081 183 aaKnown RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 RHOUQ7L0Q8 258 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 ZNF680Q8NEM1 530 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 DERL3Q96Q80 235 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 MMP17Q9ULZ9 603 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 HSPB2A8KAH6 182 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 ECI1P42126 302 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 EPHA4P54764 986 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 PCBP3P57721 371 aaKnown RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 HMGN3Q15651 99 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 MLF2Q15773 248 aaPredicted RBP13.99□□□□□ -0.17
CIITA-204ENST00000570546 HSPB2Q16082 182 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 NAXDQ8IW45 347 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 OR5M1Q8NGP8 315 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 SMIM4Q8WVI0 70 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 S1PR5Q9H228 398 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 TRBV5-3A0A0A0MS03 114 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 MSTNO14793 375 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 SLAMF6Q96DU3 332 aa13.99□□□□□ -0.17
CIITA-204ENST00000570546 PRSS37A4D1T9 235 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 SNRPGP15A8MWD9 76 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 H0YIG0 161 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 IFNA4P05014 189 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OMGP23515 440 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OGFOD3Q6PK18 319 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 DOK3Q7L591 496 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 RABEPKQ7Z6M1 372 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 MRGPRX1Q96LB2 322 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 PIGQQ9BRB3 760 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 SEMA4CQ9C0C4 833 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 PLEKHA3Q9HB20 300 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 CNR1P21554 472 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 GCH1P30793 250 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 DCTDP32321 178 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 ZNF133P52736 654 aaPredicted RBP13.98□□□□□ -0.17
CIITA-204ENST00000570546 IKZF1Q13422 519 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 AGBL5Q8NDL9 886 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 GJC3Q8NFK1 279 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OR51E1Q8TCB6 317 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 QPCTLQ9NXS2 382 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 KCNG2Q9UJ96 466 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 EXOGQ9Y2C4 368 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms