RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 KRT80Q6KB66 452 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 VHLLQ6RSH7 139 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 CPEB3Q8NE35 698 aaKnown RBP9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SLC30A7Q8NEW0 376 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SAMD8Q96LT4 415 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 ERMAPQ96PL5 475 aaPredicted RBP9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SNX18Q96RF0 628 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SYT4Q9H2B2 425 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 KCNN2Q9H2S1 579 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 PLK3Q9H4B4 646 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 REEP1Q9H902 201 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 RNF121Q9H920 327 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 BARX1Q9HBU1 254 aaPredicted RBP9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 POLE4Q9NR33 117 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 IL20Q9NYY1 176 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SLC7A8Q9UHI5 535 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 SAMHD1Q9Y3Z3 626 aaKnown RBP9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 PMF1-BGLAPU3KQ54 211 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 U3KQV3 271 aa9.56□□□□□ -0.88
SHCBP1-207ENST00000569702 A0A1W2PPL8 197 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 TCRBV3S1A0A5B6 114 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 TRIM64A6NGJ6 449 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 TRIM64BA6NI03 449 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 VSTM5A8MXK1 200 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 IDH3BO43837 385 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 MSR1P21757 451 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 GUCA1AP43080 201 aaPredicted RBP9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 PSG4Q00888 419 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 PLP2Q04941 152 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 ENDOGQ14249 297 aaKnown RBP9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 RAB35Q15286 201 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 MSMPQ1L6U9 139 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 CLEC12BQ2HXU8 276 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 RPL13AP3Q6NVV1 102 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 UGT2A3Q6UWM9 527 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 RASSF6Q6ZTQ3 369 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 CIARTQ8N365 385 aaPredicted RBP9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 AQP11Q8NBQ7 271 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 PAPD5Q8NDF8 572 aaKnown RBP9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 C18orf12Q96KH6 178 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 COX4I2Q96KJ9 171 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 DOK1Q99704 481 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 WACQ9BTA9 647 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 IFT27Q9BW83 186 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 ZNF416Q9BWM5 594 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 DGCR6LQ9BY27 220 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 NUAK2Q9H093 628 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 EGLN3Q9H6Z9 239 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 CCNB1IP1Q9NPC3 277 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 SPEF1Q9Y4P9 236 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 CDH10Q9Y6N8 788 aa9.55□□□□□ -0.88
SHCBP1-207ENST00000569702 SETD2Q9BYW2 2564 aaPredicted RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 NIPBLQ6KC79 2804 aaeCLIP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 IQCMA0A1B0GVH7 501 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 ARRDC5A6NEK1 342 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 C12orf71A8MTZ7 269 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 DCTN6O00399 190 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 BHLHE40O14503 412 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 GPRIN2O60269 458 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 SLC16A7O60669 478 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 KHDRBS3O75525 346 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 CST1P01037 141 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 IGFBP1P08833 259 aaPredicted RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 INHBBP09529 407 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 CCL2P13500 99 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 HIST1H1CP16403 213 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 STOMP27105 288 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 APEX1P27695 318 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 PCSK6P29122 969 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 EVX1P49640 407 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 PPOXP50336 477 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 EFNA4P52798 201 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 PCBD1P61457 104 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 SNRPD2P62316 118 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 GALK2Q01415 458 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 TNK1Q13470 666 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 KCNMB1Q16558 191 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 TBC1D28Q2M2D7 210 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 CD300LDQ6UXZ3 194 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 GLB1L2Q8IW92 636 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 OR8D4Q8NGM9 314 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 OR1J2Q8NGS2 313 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 MRPL24Q96A35 216 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 SLCO4A1Q96BD0 722 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 POM121L2Q96KW2 1035 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 TSSK2Q96PF2 358 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 NMNAT3Q96T66 252 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 DDOQ99489 341 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 PLA2G12AQ9BZM1 189 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 OR2H1Q9GZK4 316 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 WNT5BQ9H1J7 359 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 MMADHCQ9H3L0 296 aaPredicted RBP9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 EMC7Q9NPA0 242 aa9.54□□□□□ -0.88
SHCBP1-207ENST00000569702 FBXO9Q9UK97 447 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms