RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SPOCK3Q9BQ16 436 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ZPBPQ9BS86 351 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GTPBP2Q9BX10 602 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SPRY4Q9C004 299 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLITRK2Q9H156 845 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ABCG5Q9H222 651 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ARRDC1-AS1Q9H2J1 176 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SMOC1Q9H4F8 434 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RNF121Q9H920 327 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ELOVL3Q9HB03 270 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PLEKHA1Q9HB21 404 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GALNT9Q9HCQ5 603 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 B3GAT2Q9NPZ5 323 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SACM1LQ9NTJ5 587 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 FAM86C1Q9NVL1 165 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC39A1Q9NY26 324 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLCO1C1Q9NYB5 712 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AKAP7Q9P0M2 348 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PPP4R1LQ9P1A2 415 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TEKT2Q9UIF3 430 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AK6Q9Y3D8 172 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ETV7Q9Y603 341 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 HS3ST3B1Q9Y662 390 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 CHCHD2Q9Y6H1 151 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 V9GY05 133 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 FAM240BA0A1B0GVZ2 78 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 A0A1W2PPK0 400 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MEGF11A6BM72 1044 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TRABD2BA6NFA1 517 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 FAM47E-STBD1D6RA91 191 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 NPIPA5E9PKD4 350 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 H7C1C5 153 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CCNKO75909 580 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 RPP14O95059 124 aaKnown RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 PAHP00439 452 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TFPIP10646 304 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 HLA-DOBP13765 273 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 SNRPBP14678 240 aaKnown RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 IFNGR1P15260 489 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF823P16415 610 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ADRA2CP18825 462 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 SLC6A1P30531 599 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 KIR3DL2P43630 455 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF41P51814 821 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TPTEP56180 551 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CLDN20P56880 219 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MLF1P58340 268 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 LCN6P62502 163 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 SLC35A1P78382 337 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MRPS10P82664 201 aaKnown RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 H3F3AP84243 136 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TLE3Q04726 772 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 FOXF1Q12946 379 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CHAF1BQ13112 559 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MYBPHQ13203 477 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 DYRK1AQ13627 763 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 GPR176Q14439 515 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 POU4F3Q15319 338 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TOMM20Q15388 145 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 OR7A5Q15622 319 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ETFDHQ16134 617 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 HIST3H3Q16695 136 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MEP1BQ16820 701 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 BTBD16Q32M84 506 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 UBE2NLQ5JXB2 153 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 FAM69BQ5VUD6 431 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 SLC22A10Q63ZE4 541 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TCEAL6Q6IPX3 200 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 FAM166AQ6J272 317 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 POMZP3Q6PJE2 187 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 SLC25A47Q6Q0C1 308 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 PLET1Q6UQ28 207 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TMPPEQ6ZT21 453 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 HDDC2Q7Z4H3 204 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CDH24Q86UP0 819 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 RPS19BP1Q86WX3 136 aaKnown RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CATSPERDQ86XM0 798 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 GLB1L2Q8IW92 636 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CMTM4Q8IZR5 234 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 GTPBP8Q8N3Z3 284 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF676Q8N7Q3 588 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 OR11G2Q8NGC1 345 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 OR6X1Q8NH79 312 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ENKURQ8TC29 256 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ST7LQ8TDW4 575 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 PAQR8Q8TEZ7 354 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 DEDD2Q8WXF8 326 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 TCEAL3Q969E4 200 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 YIPF5Q969M3 257 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 RFT1Q96AA3 541 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 MIB2Q96AX9 1013 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 CREB3L1Q96BA8 519 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 WDR89Q96FK6 387 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 S100A16Q96FQ6 103 aaKnown RBP4.81□□□□□ -1.64
SF3B3-213ENST00000569687 ST6GAL2Q96JF0 529 aa4.81□□□□□ -1.64
SF3B3-213ENST00000569687 AMELYQ99218 206 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms