RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 FBXO9Q9UK97 447 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 CR1P17927 2039 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 A0A1W2PPL8 197 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 PPP1R3DO95685 299 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 GASTP01350 101 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 ZNF32P17041 273 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 LAP3P28838 519 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 PCBD1P61457 104 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 HSF2Q03933 536 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 PPP1R8Q12972 351 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 FLOT2Q14254 428 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 GK3PQ14409 553 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 TBC1D28Q2M2D7 210 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 ZNF770Q6IQ21 691 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 RPL13AP3Q6NVV1 102 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 PTCHD4Q6ZW05 846 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 SYT9Q86SS6 491 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 OR9Q2Q8NGE9 314 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 SAMD8Q96LT4 415 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 WACQ9BTA9 647 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 CHID1Q9BWS9 393 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 SYT4Q9H2B2 425 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 LRMDAQ9H2I8 198 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 PLK3Q9H4B4 646 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 POLE4Q9NR33 117 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 SLC7A8Q9UHI5 535 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 POMPQ9Y244 141 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 U3KQV3 271 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 MTORP42345 2549 aa11.93□□□□□ -0.5
HERPUD1-218ENST00000569569 TMEM129A0AVI4 362 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 TRIM64A6NGJ6 449 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 TRIM64BA6NI03 449 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 H7C1Q1 480 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 IDH3BO43837 385 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 SSX4O60224 188 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 SLC16A7O60669 478 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 KHDRBS3O75525 346 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 CST1P01037 141 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 INHBBP09529 407 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 CTLA4P16410 223 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 MSR1P21757 451 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 NOS3P29474 1203 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 APLNRP35414 380 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 NUDT6P53370 316 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 RPS23P62266 143 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 PSG4Q00888 419 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 MICAQ29983 383 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 PABPC1L2AQ5JQF8 200 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 ALDH16A1Q8IZ83 802 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 DOK1Q99704 481 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 ZNF416Q9BWM5 594 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 VNN3Q9NY84 501 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 IL20Q9NYY1 176 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 TIMM10BQ9Y5J6 103 aa11.92□□□□□ -0.5
HERPUD1-218ENST00000569569 C12orf71A8MTZ7 269 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 GNGT2O14610 69 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 SNAP29O95721 258 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 F12P00748 615 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 SCG5P05408 212 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 CCL2P13500 99 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 STOMP27105 288 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 APEX1P27695 318 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 CRABP1P29762 137 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 EVX1P49640 407 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 EFNA4P52798 201 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 TNK1Q13470 666 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 ENDOGQ14249 297 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 DNM1P34Q6PK57 102 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 DNM1P46Q6ZS02 220 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 RASSF6Q6ZTQ3 369 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 JAZF1Q86VZ6 243 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 GLB1L2Q8IW92 636 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 AQP11Q8NBQ7 271 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 OR52L1Q8NGH7 329 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 SNX18Q96RF0 628 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 NUAK2Q9H093 628 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 RERGLQ9H628 205 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 YY1AP1Q9H869 796 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms