RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LAP3P28838 519 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 IFNA8P32881 189 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GZMKP49863 264 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 RAP1BP61224 184 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 RAP1AP62834 184 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 ERVK-25P63136 954 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 PSG4Q00888 419 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 CARTPTQ16568 116 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 TBC1D28Q2M2D7 210 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 THEM4Q5T1C6 240 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GKAP1Q5VSY0 366 aaPredicted RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 CYB5R2Q6BCY4 276 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GLYATQ6IB77 296 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 RGS7BPQ6MZT1 257 aaPredicted RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 RFPL4BQ6ZWI9 263 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 FKBP9P1Q75LS8 142 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 PIGWQ7Z7B1 504 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 PGAM4Q8N0Y7 254 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 ARIH2OSQ8N7S6 290 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 AKR7LQ8NHP1 331 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 FNDC8Q8TC99 324 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 UBASH3BQ8TF42 649 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GTF3AQ92664 365 aaKnown RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 YIPF5Q969M3 257 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 C1orf159Q96HA4 380 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 Q96M85 177 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 OR2H1Q9GZK4 316 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 NSRP1Q9H0G5 558 aaKnown RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 RACGAP1Q9H0H5 632 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 OR51B6Q9H340 312 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GORASP2Q9H8Y8 452 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 CDH20Q9HBT6 801 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 NRIP3Q9NQ35 241 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 POLE4Q9NR33 117 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 ARL8BQ9NVJ2 186 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 CDC42EP3Q9UKI2 254 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 SAMD4AQ9UPU9 718 aaKnown RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 TMEM5Q9Y2B1 443 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 TEX13CA0A0J9YWL9 993 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 IQCMA0A1B0GVH7 501 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 A0A1W2PPW3 197 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ARPC2O15144 300 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ERCC1P07992 297 aaPredicted RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 TCN1P20061 433 aaPredicted RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 MSR1P21757 451 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 STOMP27105 288 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 MAGEB1P43366 347 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 UCP2P55851 309 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 KLF3P57682 345 aaPredicted RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 GNGT1P63211 74 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 MRPS11P82912 194 aaKnown RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 HSF2Q03933 536 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 KRR1Q13601 381 aaKnown RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 CHRFAM7AQ494W8 412 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ZBED5Q49AG3 693 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 FAM166AQ6J272 317 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 UGT2A3Q6UWM9 527 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 PTCHD4Q6ZW05 846 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 CYP4Z1Q86W10 505 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ZNF540Q8NDQ6 660 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 OR1J2Q8NGS2 313 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 IPCEF1Q8WWN9 437 aaPredicted RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 HPS1Q92902 700 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 RASD2Q96D21 266 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 MARS2Q96GW9 593 aaKnown RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 RSRC1Q96IZ7 334 aaKnown RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ZNF416Q9BWM5 594 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 BCL2L14Q9BZR8 327 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 MS4A5Q9H3V2 200 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 RNF121Q9H920 327 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 CHODLQ9H9P2 273 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 EMC7Q9NPA0 242 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ADA2Q9NZK5 511 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 VSX1Q9NZR4 365 aaPredicted RBP6.68□□□□□ -1.34
CDH3-209ENST00000569080 TAGLN3Q9UI15 199 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 DUSP13Q9UII6 198 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 MAGEL2Q9UJ55 1249 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 ARL2BPQ9Y2Y0 163 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 V9GYQ6 96 aa6.68□□□□□ -1.34
CDH3-209ENST00000569080 LOC100289279A0A1B0GTE1 492 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 A0A1W2PPL8 197 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 PRSS37A4D1T9 235 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ZSCAN5BA6NJL1 495 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 C17orf100A8MU93 164 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 WNT9BO14905 357 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 AHCYL1O43865 530 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 LMX1BO60663 402 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 NDUFB2O95178 105 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 TXNDC12O95881 172 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 PTHP01270 115 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 IGHV3-13P01766 116 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 GAAP10253 952 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ATP6V1B2P21281 511 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 ACHEP22303 614 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 COL8A2P25067 703 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 SDHAP31040 664 aa6.67□□□□□ -1.34
CDH3-209ENST00000569080 APLNRP35414 380 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms