RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 UGT2A3Q6UWM9 527 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 C20orf204Q6ZNR8 217 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 HIPK1Q86Z02 1210 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 CYB561A3Q8NBI2 242 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 FBXW5Q969U6 566 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 FBXO17Q96EF6 278 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 PKP2Q99959 881 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 RACGAP1Q9H0H5 632 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 RERGLQ9H628 205 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 ZNF556Q9HAH1 456 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 EMC7Q9NPA0 242 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 OAZ3Q9UMX2 235 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 COA3Q9Y2R0 106 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-220ENST00000567720 ARFGEF3Q5TH69 2177 aa14.94□□□□□ -0.02
COMMD4-220ENST00000567720 MAP1AP78559 2803 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-220ENST00000567720 SAC3D1A6NKF1 404 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 E7EQL1 145 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 G3V2T6 193 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 KHDRBS3O75525 346 aaKnown RBP14.93□□□□□ -0.02
COMMD4-220ENST00000567720 RENP00797 406 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 OSMP13725 252 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 ZNF32P17041 273 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 CD53P19397 219 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 CRMP1Q14194 572 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 RAB39AQ14964 217 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 FAM27BQ5VT28 67 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 DNM1P34Q6PK57 102 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 DPPA2Q7Z7J5 298 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 OR6V1Q8N148 313 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 SVOPLQ8N434 492 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 ZNF611Q8N823 705 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 SLC37A3Q8NCC5 494 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 IGFBPL1Q8WX77 278 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 DNAJC9Q8WXX5 260 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 NINJ1Q92982 152 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 CENPNQ96H22 339 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-220ENST00000567720 RADILQ96JH8 1075 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 DDOQ99489 341 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 ZNF416Q9BWM5 594 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 PAPOLBQ9NRJ5 636 aaKnown RBP14.93□□□□□ -0.02
COMMD4-220ENST00000567720 BAIAP2Q9UQB8 552 aa14.93□□□□□ -0.02
COMMD4-220ENST00000567720 CREBBPQ92793 2442 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 MPZL1O95297 269 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CRYAAP02489 173 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CST2P09228 141 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 POU1F1P28069 291 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CRABP1P29762 137 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 GRK5P34947 590 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 TMEM53Q6P2H8 277 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 ZBTB46Q86UZ6 589 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 ZDHHC13Q8IUH4 622 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 GLB1L2Q8IW92 636 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 PARP8Q8N3A8 854 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 ICA1LQ8NDH6 482 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CCL19Q99731 98 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 RBM4Q9BWF3 364 aaKnown RBP14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CMC2Q9NRP2 79 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 CISD1Q9NZ45 108 aaKnown RBP14.92□□□□□ -0.02
COMMD4-220ENST00000567720 POU2F3Q9UKI9 436 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 B9D1Q9UPM9 204 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 FKBP7Q9Y680 259 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 ARID1AO14497 2285 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 USF3Q68DE3 2245 aa14.92□□□□□ -0.02
COMMD4-220ENST00000567720 ANKRD65E5RJM6 399 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 MITFO75030 526 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-220ENST00000567720 SOD3P08294 240 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 DANCRP0C864 163 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 KEAP1Q14145 624 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 MEP1BQ16820 701 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 PABPC1L2AQ5JQF8 200 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 KDM4DQ6B0I6 523 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 ACSM5Q6NUN0 579 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 SLC27A4Q6P1M0 643 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 OR9Q1Q8NGQ5 310 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 C11orf40Q8WZ69 217 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 KCNS3Q9BQ31 491 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 RNF121Q9H920 327 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 SLC25A19Q9HC21 320 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 S100A14Q9HCY8 104 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 CCNB1IP1Q9NPC3 277 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 KRT84Q9NSB2 600 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 TMEFF2Q9UIK5 374 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-220ENST00000567720 KLHL21Q9UJP4 597 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 FBXL3Q9UKT7 428 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 ATP23Q9Y6H3 246 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 ITPR3Q14573 2671 aa14.91□□□□□ -0.02
COMMD4-220ENST00000567720 CHD3Q12873 2000 aaKnown RBP14.9□□□□□ -0.02
COMMD4-220ENST00000567720 FAM171A2A8MVW0 826 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 SERPINA5P05154 406 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 ZNF3P17036 446 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 DNASE1P24855 282 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 PYCR1P32322 319 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 PPP2R2BQ00005 443 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 CDK5Q00535 292 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 PSG4Q00888 419 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 HGFACQ04756 655 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 GINS1Q14691 196 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 DEPDC4Q8N2C3 294 aa14.9□□□□□ -0.02
COMMD4-220ENST00000567720 PAQR4Q8N4S7 273 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-220ENST00000567720 SLC26A10Q8NG04 563 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms