RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SCAF11Q99590 1463 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SPHKAPQ2M3C7 1700 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 TRIP12Q14669 1992 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PTPRGP23470 1445 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 A0A0A6YYH2 397 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KIR2DL5BA0A0G2JN68 375 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KIR2DL5BA0A0G2JPC4 375 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 A0A1B0GTH9 108 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MEIOCA2RUB1 952 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 A6NJ64 397 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 LYRM9A8MSI8 78 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 HACD1B0YJ81 288 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 B4DXG7 233 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SEC14L6B5MCN3 397 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MKRN2OSH3BPM6 223 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KLRC4-KLRK1H3BQV0 150 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 H7C0C1 242 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 K7EQG2 157 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 M0QXV9 152 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 HDAC3O15379 428 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PPP1R3DO95685 299 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 TBX6O95947 436 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 IGHV2-5P01817 119 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 FGF1P05230 155 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC35E2BP0CK96 405 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CALM1P0DP23 149 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CALM2P0DP24 149 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CALM3P0DP25 149 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PAX1P15863 534 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MAGP20916 626 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 EVI2BP34910 448 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 P2RY2P41231 377 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CDKN2AP42771 156 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 OR1D4P47884 311 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 RORCP51449 518 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CCR8P51685 355 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 RIDAP52758 137 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 EFNA3P52797 238 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ACVR1Q04771 509 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 IFFO1Q0D2I5 559 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 C2orf80Q0P641 193 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SLAMF1Q13291 335 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CYLC2Q14093 348 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MAD2L1BPQ15013 274 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ARL6IP1Q15041 203 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SIX1Q15475 284 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 TAL2Q16559 108 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KYAT1Q16773 422 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 EXOC3L4Q17RC7 722 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PARP15Q460N3 678 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CCDC14Q49A88 953 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ADAM5Q6NVV9 412 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ARMCX5Q6P1M9 558 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 FAHD1Q6P587 224 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CNIH2Q6PI25 160 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 C19orf48Q6RUI8 117 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CD300LGQ6UXG3 332 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 TFAP2EQ6VUC0 442 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 DCXRQ7Z4W1 244 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 DEFB132Q7Z7B7 95 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 LHFPL3Q86UP9 236 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 RALGPS2Q86X27 583 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KIR2DL5AQ8N109 375 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF557Q8N988 423 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 WDR31Q8NA23 367 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 HSD17B11Q8NBQ5 300 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ATP6V1C2Q8NEY4 427 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 NUP37Q8NFH4 326 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 OR4Q3Q8NH05 313 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 KIR2DL5BQ8NHK3 375 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ITFG1Q8TB96 612 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SSC4DQ8WTU2 575 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 IFT81Q8WYA0 676 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CHMP6Q96FZ7 201 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PGLYRP4Q96LB8 373 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 C9orf85Q96MD7 179 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SCGB3A2Q96PL1 93 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 FOXC2Q99958 501 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 TIMM29Q9BSF4 260 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SPZ1Q9BXG8 430 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 POTEKPQ9BYX7 375 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SHCBP1LQ9BZQ2 653 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC38A1Q9H2H9 487 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 LRRC19Q9H756 370 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 FOLH1BQ9HBA9 442 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MRM3Q9HC36 420 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CTPS2Q9NRF8 586 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CLN6Q9NWW5 311 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF282Q9UDV7 671 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 PKD1L2Q7Z442 2459 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MYO3AQ8NEV4 1616 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 ABCA5Q8WWZ7 1642 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 MAGI2Q86UL8 1455 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 FRMPD3Q5JV73 1810 aa2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 CEP170BQ9Y4F5 1589 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-211ENST00000566550 NPATQ14207 1427 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 ZMYM4Q5VZL5 1548 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 RICTORQ6R327 1708 aa2.69□□□□□ -1.98
HERPUD1-211ENST00000566550 IGHV3OR16-12A0A075B7B8 117 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms