RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 BIDP55957 195 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 SIRPAP78324 504 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 FBXW9Q5XUX1 488 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 GPR139Q6DWJ6 353 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 ZNF474Q6S9Z5 364 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 C20orf196Q8IYI0 205 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 GABRG1Q8N1C3 465 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 LNX2Q8N448 690 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 ARIH2OSQ8N7S6 290 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 OR8D4Q8NGM9 314 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 TMEM54Q969K7 222 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 TMEM80Q96HE8 168 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 BOD1Q96IK1 185 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 DDOQ99489 341 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 MGLLQ99685 303 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 MND1Q9BWT6 205 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 POLDIP3Q9BY77 421 aaKnown RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 NDEL1Q9GZM8 345 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 MOV10Q9HCE1 1003 aaKnown RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 FOXD3Q9UJU5 478 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 PROCRQ9UNN8 238 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 GRIP1Q9Y3R0 1128 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 IER3IP1Q9Y5U9 82 aa11.14□□□□□ -0.63
SF3B3-206ENST00000565990 HELZ2Q9BYK8 2649 aaKnown RBP11.14□□□□□ -0.63
SF3B3-206ENST00000565990 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-206ENST00000565990 A6NIZ1 184 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 RPL36A-HNRNPH2H7BZ11 118 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
SF3B3-206ENST00000565990 SLC43A1O75387 559 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 APOA1P02647 267 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 PGA4P0DJD7 388 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 PGA3P0DJD8 388 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 C21orf33P30042 268 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-206ENST00000565990 RPL4P36578 427 aaKnown RBP11.13□□□□□ -0.63
SF3B3-206ENST00000565990 RAP1BP61224 184 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 RAP1AP62834 184 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 ERVK-25P63136 954 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 IFITM3Q01628 133 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 RUNX1T1Q06455 604 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 TSPO2Q5TGU0 170 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 FAM205BPQ63HN1 556 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 NIPAL3Q6P499 406 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 LRFN4Q6PJG9 635 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 CASP12Q6UXS9 341 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 Q6ZT83 130 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 BEND4Q6ZU67 534 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 ZNF100Q8IYN0 542 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 POMGNT2Q8NAT1 580 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 CA5BP1Q8WTZ4 195 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 COQ7Q99807 217 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 TSSK6Q9BXA6 273 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 C12orf49Q9H741 205 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 SLC7A10Q9NS82 523 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 ELOVL5Q9NYP7 299 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 GRHPRQ9UBQ7 328 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 MALT1Q9UDY8 824 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 IL20RAQ9UHF4 553 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 PRSS50Q9UI38 385 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.13□□□□□ -0.63
SF3B3-206ENST00000565990 STUB1Q9UNE7 303 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 BAIAP2Q9UQB8 552 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 ADAM18Q9Y3Q7 739 aa11.13□□□□□ -0.63
SF3B3-206ENST00000565990 UPK3AO75631 287 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 CLDN14O95500 239 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 PTHP01270 115 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 SDHAP31040 664 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 ACVR1BP36896 505 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 LSM3P62310 102 aaKnown RBP11.12□□□□□ -0.63
SF3B3-206ENST00000565990 EFNB1P98172 346 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 TFF3Q07654 80 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 GINS1Q14691 196 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 P2RY6Q15077 328 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 STK11Q15831 433 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 KLHL22Q53GT1 634 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 PHYHD1Q5SRE7 291 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 ACSM5Q6NUN0 579 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 HDDC2Q7Z4H3 204 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 CADM3Q8N126 398 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 OR2T33Q8NG76 320 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 OR4Q3Q8NH05 313 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
SF3B3-206ENST00000565990 UBE2FQ969M7 185 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 Q96M85 177 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 ERMAPQ96PL5 475 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-206ENST00000565990 SNX18Q96RF0 628 aa11.12□□□□□ -0.63
SF3B3-206ENST00000565990 RHNO1Q9BSD3 238 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms