RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SLC9A3P48764 834 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 PSG4Q00888 419 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 CCNIQ14094 377 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 NKPD1Q17RQ9 610 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 TMEM255AQ5JRV8 349 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 AKR7LQ8NHP1 331 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 FNDC8Q8TC99 324 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 C11orf40Q8WZ69 217 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 RBP7Q96R05 134 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 WNT5BQ9H1J7 359 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 KCNN2Q9H2S1 579 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 HINT3Q9NQE9 182 aaKnown RBP13.38□□□□□ -0.27
CDH3-204ENST00000565453 ZNF275Q9NSD4 429 aaPredicted RBP13.38□□□□□ -0.27
CDH3-204ENST00000565453 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 NKIRAS2Q9NYR9 191 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 SVEP1Q4LDE5 3571 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 MXRA5Q9NR99 2828 aa13.38□□□□□ -0.27
CDH3-204ENST00000565453 A6NIZ1 184 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 WNT9BO14905 357 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 GSTA4O15217 222 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 IGHV3-13P01766 116 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 SCG5P05408 212 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 CST2P09228 141 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 NCK1P16333 377 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 HNF1AP20823 631 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 LAP3P28838 519 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 GPR4P46093 362 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 NUDT2P50583 147 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 TMEM33P57088 247 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 SELENOVP59797 346 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 RAP1BP61224 184 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 RAP1AP62834 184 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ERVK-25P63136 954 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ENDOGQ14249 297 aaKnown RBP13.37□□□□□ -0.27
CDH3-204ENST00000565453 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ZNF730Q6ZMV8 503 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 FKBP9P1Q75LS8 142 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 OAFQ86UD1 273 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ZNF101Q8IZC7 436 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 OR1J1Q8NGS3 322 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 CLDND2Q8NHS1 167 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
CDH3-204ENST00000565453 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ANKRD19PQ9H560 264 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
CDH3-204ENST00000565453 NDUFAB1O14561 156 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 ICMTO60725 284 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 DVL1P1P54792 670 aaPredicted RBP13.36□□□□□ -0.27
CDH3-204ENST00000565453 PSME3P61289 254 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 FAM122BQ7Z309 247 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 FAM162AQ96A26 154 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 MARS2Q96GW9 593 aaKnown RBP13.36□□□□□ -0.27
CDH3-204ENST00000565453 KCTD14Q9BQ13 255 aaPredicted RBP13.36□□□□□ -0.27
CDH3-204ENST00000565453 ELAC2Q9BQ52 826 aaKnown RBP13.36□□□□□ -0.27
CDH3-204ENST00000565453 ZNF416Q9BWM5 594 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 NMNAT1Q9HAN9 279 aaPredicted RBP13.36□□□□□ -0.27
CDH3-204ENST00000565453 GPR160Q9UJ42 338 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 ADAM18Q9Y3Q7 739 aa13.36□□□□□ -0.27
CDH3-204ENST00000565453 C5orf49A4QMS7 147 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 FAM157AC9JC47 383 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 H7C1C5 153 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 PTP4A3O75365 173 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 CD14P08571 375 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 CCNOP22674 350 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 MPV17P39210 176 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 LIMS1P48059 325 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
CDH3-204ENST00000565453 LCN6P62502 163 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 CCL8P80075 99 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 PCGF3Q3KNV8 242 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 MESTQ5EB52 335 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 TMEM154Q6P9G4 183 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 SYT9Q86SS6 491 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 ICA1LQ8NDH6 482 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 SNX33Q8WV41 574 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 C7orf34Q96L11 122 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 Q96M85 177 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 POLE4Q9NR33 117 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 TMEFF2Q9UIK5 374 aaPredicted RBP13.35□□□□□ -0.27
CDH3-204ENST00000565453 TIMM10BQ9Y5J6 103 aa13.35□□□□□ -0.27
CDH3-204ENST00000565453 A0A1W2PPL8 197 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 B4DSR2 109 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 PPIHO43447 177 aaKnown RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 TFP02787 698 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 MSR1P21757 451 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 PRDX6P30041 224 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 CRYBB2P43320 205 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 MMP15P51511 669 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 LMO4P61968 165 aa13.34□□□□□ -0.27
CDH3-204ENST00000565453 SRSF2Q01130 221 aaKnown RBP13.34□□□□□ -0.27
CDH3-204ENST00000565453 GLO1Q04760 184 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms