RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CLDN22Q8N7P3 220 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 LRRC75AQ8NAA5 344 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ICA1LQ8NDH6 482 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 AKR7LQ8NHP1 331 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 SLC25A40Q8TBP6 338 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 KLF14Q8TD94 323 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF418Q8TF45 676 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 FAM216AQ8WUB2 273 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 IPCEF1Q8WWN9 437 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 NSMAFQ92636 917 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 LRRC58Q96CX6 371 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF583Q96ND8 569 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 WNT5BQ9H1J7 359 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 TXNIPQ9H3M7 391 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 SAP30LQ9HAJ7 183 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 DECR2Q9NUI1 292 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 BAG5Q9UL15 447 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 HIF3AQ9Y2N7 669 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 CMYA5Q8N3K9 4069 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 A0A0G2JMP0 313 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 A0A0G2JND7 137 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 A0A0X1KG70 313 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 C5orf49A4QMS7 147 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ZSCAN5BA6NJL1 495 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 CLDN25C9JDP6 229 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 J3QLI3 93 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SPRY3O43610 288 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 PIP5K1CO60331 668 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 NGFP01138 241 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 NPPAP01160 153 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 FSHBP01225 129 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 IGHMP01871 453 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SCG5P05408 212 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ADH4P08319 380 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 VIMP08670 466 aaKnown RBP7.27□□□□□ -1.25
CAPN3-213ENST00000565173 THRBP10828 461 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 EGR1P18146 543 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ADRA2CP18825 462 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 DRD4P21917 467 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 CCNOP22674 350 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 LAP3P28838 519 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 RBMXP38159 391 aaKnown RBP7.27□□□□□ -1.25
CAPN3-213ENST00000565173 MDH1P40925 334 aaKnown RBP7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SCGB2A2Q13296 93 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SGCAQ16586 387 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 HFEQ30201 348 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF718Q3SXZ3 478 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ALG10Q5BKT4 473 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SHQ1Q6PI26 577 aaKnown RBP7.27□□□□□ -1.25
CAPN3-213ENST00000565173 FOXL2NBQ6ZUU3 175 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 RFPL4BQ6ZWI9 263 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 HDDC2Q7Z4H3 204 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 OR4M2Q8NGB6 313 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 OR8J3Q8NGG0 315 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 C10orf82Q8WW14 230 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 CCL17Q92583 94 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 RAB39BQ96DA2 213 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ELMOD3Q96FG2 381 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ECSITQ9BQ95 431 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 SIKE1Q9BRV8 207 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ALG12Q9BV10 488 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 OR2H1Q9GZK4 316 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 OR2J1Q9GZK6 312 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 KCNN2Q9H2S1 579 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 CCNB1IP1Q9NPC3 277 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 STX18Q9P2W9 335 aaKnown RBP7.27□□□□□ -1.25
CAPN3-213ENST00000565173 A4GNTQ9UNA3 340 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 MED31Q9Y3C7 131 aa7.27□□□□□ -1.25
CAPN3-213ENST00000565173 DYSFO75923 2080 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 FFAR1O14842 300 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 TPD52L2O43399 206 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 MT-ND5P03915 603 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 CD55P08174 381 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 CST2P09228 141 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 ZFP36P26651 326 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 GCH1P30793 250 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 KDELR2P33947 212 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 LIPAP38571 399 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 GDI2P50395 445 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 RPL27P61353 136 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 SELENOWP63302 87 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 CD47Q08722 323 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 SF3A3Q12874 501 aaKnown RBP eCLIP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 PSG7Q13046 419 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 KLF10Q13118 480 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 ENDOGQ14249 297 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 TAF11Q15544 211 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 CYBRD1Q53TN4 286 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 COQ5Q5HYK3 327 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 C1orf174Q8IYL3 243 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 TEX29Q8N6K0 151 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 ZDHHC22Q8N966 263 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 ABHD4Q8TB40 342 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 GEMIN6Q8WXD5 167 aaKnown RBP7.26□□□□□ -1.25
CAPN3-213ENST00000565173 RAB1CQ92928 201 aa7.26□□□□□ -1.25
CAPN3-213ENST00000565173 GCDHQ92947 438 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms