RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 ZNF425Q6IV72 752 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 FAM111BQ6SJ93 734 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SSX6Q7RTT6 188 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SZRD1Q7Z422 152 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 RABEPKQ7Z6M1 372 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TMEM200AQ86VY9 491 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 VRK2Q86Y07 508 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SLC43A2Q8N370 569 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 AVL9Q8NBF6 648 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 OR2T27Q8NH04 317 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 RSC1A1Q92681 617 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 LRFN5Q96NI6 719 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 TMEM27Q9HBJ8 222 aa10.03□□□□□ -0.8
TCF4-222ENST00000564228 SIDT1Q9NXL6 827 aaKnown RBP10.03□□□□□ -0.8
TCF4-222ENST00000564228 SPTBP11277 2137 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 TRBV23-1A0A0A0MS06 115 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 RHPN2P1A8MT19 583 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 F5H0A9 414 aaPredicted RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 OR1F1O43749 312 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 TBX6O95947 436 aaPredicted RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 OR4E1P0C645 316 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 MYF5P13349 255 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 EDNRAP25101 427 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 RBM34P42696 430 aaKnown RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 AKR1C2P52895 323 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 PPP1CAP62136 330 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 CSNK1G2P78368 415 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 AKR1C1Q04828 323 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 GGTLC2Q14390 218 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 NKPD1Q17RQ9 610 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 PLEKHN1Q494U1 663 aaPredicted RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 ARMC6Q6NXE6 501 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 HMGN2P46Q86SG4 172 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 OOSP2Q86WS3 158 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 SDR9C7Q8NEX9 313 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 SLC25A21Q9BQT8 299 aaPredicted RBP10.02□□□□□ -0.81
TCF4-222ENST00000564228 OR51V1Q9H2C8 321 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 ARRDC1-AS1Q9H2J1 176 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 POLE3Q9NRF9 147 aa10.02□□□□□ -0.81
TCF4-222ENST00000564228 FAM221BA6H8Z2 402 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 OR2W5A6NFC9 320 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 FADS1O60427 444 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 CLN5O75503 358 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 CD74P04233 296 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 GIMD1P0DJR0 217 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 MPLP40238 635 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ADH7P40394 386 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SLC16A1P53985 500 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 REEP5Q00765 189 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TGM3Q08188 693 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TMEM244Q5VVB8 128 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 LIPNQ5VXI9 398 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SLC23A3Q6PIS1 610 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 OGFOD3Q6PK18 319 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SLC35F3Q8IY50 421 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 DND1Q8IYX4 353 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 BOLLQ8N9W6 283 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 OR51S1Q8NGJ8 323 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 FLVCR1-AS1Q8TAF5 88 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TAAR9Q96RI9 348 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SLITRK2Q9H156 845 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 POFUT1Q9H488 388 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 KLHL31Q9H511 634 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 C5AR2Q9P296 337 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 LRIT1Q9P2V4 623 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 NCDNQ9UBB6 729 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ASH2LQ9UBL3 628 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ZNF281Q9Y2X9 895 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 SCN2AQ99250 2005 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ARGFXA6NJG6 315 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 RTCAO00442 366 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 CER1O95813 267 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 IFNGP01579 166 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 STATHP02808 62 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 HMGN2P05204 90 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 GTF2F2P13984 249 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 PVRP15151 417 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 CBR1P16152 277 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 NFYBP25208 207 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 ITPKBP27987 946 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 RPS15P62841 145 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 DEFA6Q01524 100 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 CRMP1Q14194 572 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 LASP1Q14847 261 aaKnown RBP10.01□□□□□ -0.81
TCF4-222ENST00000564228 SLC6A19Q695T7 634 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 TMPRSS11FQ6ZWK6 438 aa10.01□□□□□ -0.81
TCF4-222ENST00000564228 C17orf82Q86X59 251 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms