RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZER1Q7Z7L7 766 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 SYT9Q86SS6 491 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 SVOPLQ8N434 492 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 ZNF525Q8N782 197 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 OR10H5Q8NGA6 315 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 SORCS2Q96PQ0 1159 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 DOK1Q99704 481 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 BCL2L14Q9BZR8 327 aa17.13■□□□□ 0.33
CMTM3-207ENST00000564060 TCRBV5S2A0A599 114 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 C12orf71A8MTZ7 269 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 H7C1C5 153 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 NDUFS8O00217 210 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 LY6G6DO95868 133 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 TXNDC12O95881 172 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 LAP3P28838 519 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 PCSK6P29122 969 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 RAD52P43351 418 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 SELENOVP59797 346 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 LCN6P62502 163 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 PABPC1L2AQ5JQF8 200 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 RGS7BPQ6MZT1 257 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-207ENST00000564060 RPL13AP3Q6NVV1 102 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 C1orf94Q6P1W5 598 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 DNM1P34Q6PK57 102 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 THSD4Q6ZMP0 1018 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 NEU4Q8WWR8 484 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-207ENST00000564060 RASD2Q96D21 266 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 OR52D1Q9H346 318 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 TIMM10BQ9Y5J6 103 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 IER3IP1Q9Y5U9 82 aa17.12■□□□□ 0.33
CMTM3-207ENST00000564060 M0R233 179 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 SOCS2O14508 198 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 IMPA2O14732 288 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 SYNGR3O43761 229 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 GPRIN2O60269 458 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 HOXB6P17509 224 aaKnown RBP17.11■□□□□ 0.33
CMTM3-207ENST00000564060 STOMP27105 288 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 PDLIM4P50479 330 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 HMGA2P52926 109 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 TRAP1Q12931 704 aaKnown RBP17.11■□□□□ 0.33
CMTM3-207ENST00000564060 TSPAN31Q12999 210 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 RFX4Q33E94 735 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 C1orf174Q8IYL3 243 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 CCDC124Q96CT7 223 aaKnown RBP17.11■□□□□ 0.33
CMTM3-207ENST00000564060 THTPAQ9BU02 230 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 MRPL37Q9BZE1 423 aaKnown RBP17.11■□□□□ 0.33
CMTM3-207ENST00000564060 MS4A5Q9H3V2 200 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 POLE4Q9NR33 117 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 VSX1Q9NZR4 365 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-207ENST00000564060 IL20RAQ9UHF4 553 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 GPR160Q9UJ42 338 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
CMTM3-207ENST00000564060 IGHV4-30-2A0A087WSY4 118 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 TMEM129A0AVI4 362 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 ARPC3O15145 178 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 GYG2O15488 501 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 KHDRBS3O75525 346 aaKnown RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 CRABP1P29762 137 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 GSSP48637 474 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 GDI2P50395 445 aaKnown RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 FXYD6P3P58550 94 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 MS4A2Q01362 244 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 SCRN3Q0VDG4 424 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 C10orf105Q8TEF2 133 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 ERMAPQ96PL5 475 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 SNX18Q96RF0 628 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 GPA33Q99795 319 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 PIMREGQ9BSJ6 248 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 OR2H1Q9GZK4 316 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 SYT4Q9H2B2 425 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 REEP1Q9H902 201 aa17.1■□□□□ 0.33
CMTM3-207ENST00000564060 EIF3KQ9UBQ5 218 aaKnown RBP17.1■□□□□ 0.33
CMTM3-207ENST00000564060 YLPM1P49750 1951 aaKnown RBP17.09■□□□□ 0.33
CMTM3-207ENST00000564060 IDH3BO43837 385 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 UBOX5O94941 541 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 PPP1R3DO95685 299 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 LCKP06239 509 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 FAM157BP0CG42 384 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 RAP2AP10114 183 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 CCL2P13500 99 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 NOS3P29474 1203 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 UCP2P55851 309 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 PSG4Q00888 419 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 GK3PQ14409 553 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 PGM2L1Q6PCE3 622 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 ZNF620Q6ZNG0 422 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 JAZF1Q86VZ6 243 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 GLB1L2Q8IW92 636 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 OR52L1Q8NGH7 329 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 C11orf40Q8WZ69 217 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 ZNF416Q9BWM5 594 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 NDRG4Q9ULP0 352 aaKnown RBP17.09■□□□□ 0.33
CMTM3-207ENST00000564060 RTTNQ86VV8 2226 aa17.09■□□□□ 0.33
CMTM3-207ENST00000564060 A0A1W2PPW3 197 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 LOC390937A0A1W2PQ73 354 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms