RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 CBLL1Q75N03 491 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 EPHX4Q8IUS5 362 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 EGFL6Q8IUX8 553 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 OR1J1Q8NGS3 322 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 METTL6Q8TCB7 284 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 RAX2Q96IS3 184 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 DUX3Q96PT4 197 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 GSTO2Q9H4Y5 243 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 CDH20Q9HBT6 801 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 EQTNQ9NQ60 294 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 CTPS2Q9NRF8 586 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 TMEM216Q9P0N5 145 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 CTSZQ9UBR2 303 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 IGLV1-36A0A0B4J1U3 117 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CCL24O00175 119 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF264O43296 627 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 OR10H3O60404 316 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 TBX19O60806 448 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 SUPT7LO94864 414 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 UBL3O95164 117 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 HSPA4LO95757 839 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CYB5R3P00387 301 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 SNRNP70P08621 437 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 PRPS2P11908 318 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CCL2P13500 99 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 IMPDH1P20839 514 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 GCAP28676 217 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CCNJQ5T5M9 372 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 MBNL2Q5VZF2 373 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ANKRD26P1Q6NSI1 321 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CDRT4Q8N9R6 151 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 TNFRSF14Q92956 283 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 CIDECQ96AQ7 238 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 L3HYPDHQ96EM0 354 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 OTUB1Q96FW1 271 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 FCRL1Q96LA6 429 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 PAFAH2Q99487 392 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 THUMPD3Q9BV44 507 aaKnown RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 PTDSS2Q9BVG9 487 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 TINAGL1Q9GZM7 467 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ADPRHL2Q9NX46 363 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 ERVK-18Q9QC07 812 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 TCF19Q9Y242 345 aa8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 POLR3HQ9Y535 204 aaPredicted RBP8.39□□□□□ -1.07
HDGFL3-204ENST00000563790 FCMRO60667 390 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 URI1O94763 535 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 AKR7A3O95154 331 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ENO1P06733 434 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ECHS1P30084 290 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 NTSP30990 170 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 SERPINB4P48594 390 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 PRKAA2P54646 552 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 PKNOX1P55347 436 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 BTKQ06187 659 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 HSPB3Q12988 150 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 THEM4Q5T1C6 240 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 NOXRED1Q6NXP6 359 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 LRIG3Q6UXM1 1119 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF813Q6ZN06 617 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ARMC8Q8IUR7 673 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM76AQ8TAV0 307 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ATF6BQ99941 703 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 SMURF1Q9HCE7 757 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 ZNF180Q9UJW8 692 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 KCNE3Q9Y6H6 103 aa8.38□□□□□ -1.07
HDGFL3-204ENST00000563790 SURF4O15260 269 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 VAMP5O95183 116 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 BRI3O95415 125 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 ECDO95905 644 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 SPNP16150 400 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 PRPH2P23942 346 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 PAX6P26367 422 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 HMOX2P30519 316 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 PMELP40967 661 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 ANXA11P50995 505 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 P2RY4P51582 365 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 DLX1P56177 255 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 PLAURQ03405 335 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 SKP2Q13309 424 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 SRSF7Q16629 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 MTX3Q5HYI7 312 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 FAM201AQ5SY85 155 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 TMEM225Q6GV28 225 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 TIFABQ6ZNK6 161 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 TMEM219Q86XT9 240 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 LYPD6Q86Y78 171 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 Q8N1Y9 231 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 OR2Z1Q8NG97 314 aa8.37□□□□□ -1.07
HDGFL3-204ENST00000563790 CDC26Q8NHZ8 85 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms