RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 EPHA6Q9UF33 1036 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 CGGBP1Q9UFW8 167 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 PLEKHA6Q9Y2H5 1048 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 CLDN4O14493 209 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 BCL2L11O43521 198 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 OR2F2O95006 317 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CD8AP01732 235 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 SPARCP09486 303 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 KIR2DL1P43626 348 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 GPR3P46089 330 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 OR2F1Q13607 317 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 ALG11Q2TAA5 492 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TMEM184AQ6ZMB5 413 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 LIPHQ8WWY8 451 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 EDAQ92838 391 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC39A1Q9NY26 324 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TNFSF18Q9UNG2 199 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 OR14I1A6ND48 311 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 K7EQS6 105 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 SULT1C2O00338 296 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 SCDO00767 359 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CD2P06729 351 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 HOXC4P09017 264 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 MYOGP15173 224 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 ST6GAL1P15907 406 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TACR3P29371 465 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 NTSR1P30989 418 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 PRAMEF17Q5VTA0 474 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TMEM225Q6GV28 225 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TAF8Q7Z7C8 310 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CD163Q86VB7 1156 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 LINC00518Q8N0U6 118 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TAAR8Q969N4 342 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 BARX1Q9HBU1 254 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 TAS2R4Q9NYW5 299 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 PRELID3BQ9Y3B1 194 aa12.61□□□□□ -0.39
VPS9D1-202ENST00000561976 HSPB2A8KAH6 182 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 MPTX1A8MV57 137 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 DISC1C4P0D8 188 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 PNPP00491 289 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 MELTFP08582 738 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 FLI1Q01543 452 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 BIKQ13323 160 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 HSPB2Q16082 182 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 ARMC6Q6NXE6 501 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 JAGN1Q8N5M9 183 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 OR5T2Q8NGG2 359 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 NKD1Q969G9 470 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC41A2Q96JW4 573 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 TSNAXQ99598 290 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 UBQLN4Q9NRR5 601 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 F5H0A9 414 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF264O43296 627 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 GP1BAP07359 652 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 HOXB2P14652 356 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 COL9A1P20849 921 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 ATP1B3P54709 279 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 SKP2Q13309 424 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 SNTB1Q13884 538 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 OR10K2Q6IF99 312 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 METTL27Q8N6F8 245 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 RELTQ969Z4 430 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 TWSG1Q9GZX9 223 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 UNC80Q8N2C7 3258 aa12.6□□□□□ -0.39
VPS9D1-202ENST00000561976 A0A1B0GTI1 187 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 DOK2O60496 412 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 GLULP15104 373 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 CFPP27918 469 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 AKR1C2P52895 323 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 CAPZA1P52907 286 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 SKP1P63208 163 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ADAM8P78325 824 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 AKR1C1Q04828 323 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 CCINQ13939 588 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF345Q14585 488 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 LPCAT3Q6P1A2 487 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 C3orf33Q6P1S2 294 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ACOT7LQ6ZUV0 252 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF679Q8IYX0 411 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 AVL9Q8NBF6 648 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 OR4S1Q8NGB4 309 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 METTL21AQ8WXB1 218 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF524Q96C55 264 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms