RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 RFLNAQ6ZTI6 216 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 ANKRD37Q7Z713 158 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 NT5DC3Q86UY8 548 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 CDC20BQ86Y33 519 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TBC1D21Q8IYX1 336 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 OR4E2Q8NGC2 313 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 LILRB4Q8NHJ6 448 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 ADIPOR1Q96A54 375 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 LRRC45Q96CN5 670 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 FAF2Q96CS3 445 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 C1orf147Q96MC9 270 aaPredicted RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 C12orf66Q96MD2 445 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 ZNF285Q96NJ3 590 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TRIB3Q96RU7 358 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SECISBP2Q96T21 854 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 ANP32EQ9BTT0 268 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 NT5MQ9NPB1 228 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 IL26Q9NPH9 171 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 UTP6Q9NYH9 597 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 MRPL39Q9NYK5 338 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 AIPL1Q9NZN9 384 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 CHMP5Q9NZZ3 219 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 IL17CQ9P0M4 197 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 DHRS4-AS1Q9P1J3 65 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 PCSK1NQ9UHG2 260 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 BLOC1S6Q9UL45 172 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SNX6Q9UNH7 406 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 MRPS7Q9Y2R9 242 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 PCYT1BQ9Y5K3 369 aaPredicted RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 PDCD11Q14690 1871 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 ATG2BQ96BY7 2078 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 PTPRDP23468 1912 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 PIEZO2Q9H5I5 2752 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SDK1Q7Z5N4 2213 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 NUP205Q92621 2012 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PCNX3Q9H6A9 2034 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 COL6A6A6NMZ7 2263 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TENM4Q6N022 2769 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 HELZP42694 1942 aaKnown RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 NSG1A0A0A6YYJ2 146 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 A0A0J9YY10 115 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 GLYATL1P3A0A0U1RQE8 302 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 LIN7AO14910 233 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 TPST2O60704 377 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TBX19O60806 448 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 LCA5LO95447 670 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 AP2A1O95782 977 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PNMA6AP0CW24 399 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 CLUP10909 449 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 ATP1B2P14415 290 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 CXCR2P25025 360 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 NSG1P42857 185 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 XCR1P46094 333 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 GABRA4P48169 554 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PRLHRP49683 370 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 MAXP61244 160 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 RND3P61587 244 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 UBE2HP62256 183 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 CSNK1G2P78368 415 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 OGDHQ02218 1023 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 CD47Q08722 323 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 SERTAD2Q14140 314 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TAF1AQ15573 450 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 Q1RN00 199 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 ATAD3CQ5T2N8 411 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 ASPHD2Q6ICH7 369 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 SULT1C3Q6IMI6 304 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 NIPAL1Q6NVV3 410 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 BAIAP2L2Q6UXY1 529 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 SYT10Q6XYQ8 523 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 RGS9BPQ6ZS82 235 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 NLRP9Q7RTR0 991 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PRSS48Q7RTY5 328 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 DPY19L4Q7Z388 723 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 BPIFB2Q8N4F0 458 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TTC29Q8NA56 475 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 OR11G2Q8NGC1 345 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 CA5BP1Q8WTZ4 195 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 DCUN1D1Q96GG9 259 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PANX2Q96RD6 677 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PEBP4Q96S96 227 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TSSK1BQ9BXA7 367 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 TRIM45Q9H8W5 580 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 IMP3Q9NV31 184 aaKnown RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 EURLQ9NYK6 297 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 UVRAGQ9P2Y5 699 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 ZNF282Q9UDV7 671 aaPredicted RBP2.86□□□□□ -1.95
HERC1-215ENST00000561436 OR10H1Q9Y4A9 318 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 SPAG17Q6Q759 2223 aa2.86□□□□□ -1.95
HERC1-215ENST00000561436 CABIN1Q9Y6J0 2220 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 PTPRBP23467 1997 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 POLQO75417 2590 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 IGLV3-16A0A075B6K0 115 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 FAM74A7A6NL05 159 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 USP27XA6NNY8 438 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 HACD1B0YJ81 288 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 BTN3A3O00478 584 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 PES1O00541 588 aaKnown RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 SDHDO14521 159 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms