RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PRRG3Q9BZD7 231 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 YIPF3Q9GZM5 350 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 OR51B5Q9H339 312 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 IKZF5Q9H5V7 419 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 ARMC7Q9H6L4 198 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 ZDHHC11Q9H8X9 412 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 CXorf21Q9HAI6 301 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 BCL2L10Q9HD36 194 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 MRPS30Q9NP92 439 aaKnown RBP2.8□□□□□ -1.96
SPG11-225ENST00000561391 SLC35C2Q9NQQ7 365 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 DEPPQ9NTK1 212 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 EXD2Q9NVH0 621 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 SPHK1Q9NYA1 384 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 CISD1Q9NZ45 108 aaKnown RBP2.8□□□□□ -1.96
SPG11-225ENST00000561391 TAC3Q9UHF0 121 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 PHF11Q9UIL8 331 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 SLC9A8Q9Y2E8 581 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 MAGED1Q9Y5V3 778 aaPredicted RBP2.8□□□□□ -1.96
SPG11-225ENST00000561391 SNX8Q9Y5X2 465 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 A3GALT2U3KPV4 340 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 SACSQ9NZJ4 4579 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 NOTCH3Q9UM47 2321 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 ROS1P08922 2347 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 IGLV3-12A0A075B6K2 115 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A0A6YYD5 115 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A0G2JMM0 328 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A0J9YY10 115 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PPB8 328 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PPV9 198 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PRS3 328 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 IRGMA1A4Y4 181 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 HTR3EA5X5Y0 456 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SYNDIG1LA6NDD5 238 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 VGLL3A8MV65 326 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 KIR3DP1A8MWS1 328 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 A8MXE2 369 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MYO1GB0I1T2 1018 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TNFRSF11BO00300 401 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DLGAP1O14490 977 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 PLPP1O14494 284 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SEC14L5O43304 696 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 EMC8O43402 210 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SRPX2O60687 465 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 CCNB2O95067 398 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 GADD45GO95257 159 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 PGM3O95394 542 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ETHE1O95571 254 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SNAP29O95721 258 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 C6orf47O95873 294 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 AK1P00568 194 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SEMG1P04279 462 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SERPIND1P05546 499 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 FHP07954 510 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 GUSBP08236 651 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TFPTP0C1Z6 253 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SMIM18P0DKX4 95 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 NR2F1P10589 423 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 NAGAP17050 411 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 GSTM3P21266 225 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 PAX7P23759 505 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CRHBPP24387 322 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ATP5A1P25705 553 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 DCKP27707 260 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DCTDP32321 178 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 PIGAP37287 484 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CDKN2CP42773 168 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SSR2P43308 183 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SERPINB10P48595 397 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 KHKP50053 298 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CRISP3P54108 245 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DSCR9P59020 149 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 HILS1P60008 231 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CDC42P60953 191 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ISL1P61371 349 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 KCNJ10P78508 379 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MAT1AQ00266 395 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 NPRL3Q12980 569 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SLAMF1Q13291 335 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 RNPS1Q15287 305 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 EXT1Q16394 746 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TMEM44Q2T9K0 475 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ADPRMQ3LIE5 342 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ACSF3Q4G176 576 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.79□□□□□ -1.96
SPG11-225ENST00000561391 NDUFAF5Q5TEU4 345 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ZNF691Q5VV52 312 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SAXO2Q658L1 398 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 AWAT2Q6E213 333 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TYW3Q6IPR3 259 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 CDC73Q6P1J9 531 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ENPP6Q6UWR7 440 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 C1orf122Q6ZSJ8 110 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 C6orf120Q7Z4R8 191 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ASPGQ86U10 573 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 HAPLN4Q86UW8 402 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 RNF130Q86XS8 419 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 EPHX4Q8IUS5 362 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 LACC1Q8IV20 430 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CLECL1Q8IZS7 167 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TAGAPQ8N103 731 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms