RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TMEM45BQ96B21 275 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 TMEM80Q96HE8 168 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 C18orf12Q96KH6 178 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 SLC30A2Q9BRI3 323 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 RSPO3Q9BXY4 272 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 TRIM2Q9C040 744 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 OR11A1Q9GZK7 315 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 FGF20Q9NP95 211 aaPredicted RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 SERINC1Q9NRX5 453 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 CALML5Q9NZT1 146 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 EMC3Q9P0I2 261 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 PRSS50Q9UI38 385 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 DIMT1Q9UNQ2 313 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 LSM2Q9Y333 95 aaKnown RBP6.06□□□□□ -1.44
SPG11-224ENST00000561268 RNF115Q9Y4L5 304 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 FLVCR1Q9Y5Y0 555 aa6.06□□□□□ -1.44
SPG11-224ENST00000561268 TMEM72A0PK05 275 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 OR5H1A6NKK0 313 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SHISA9B4DS77 424 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 FTCDNL1E5RQL4 147 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SULT2B1O00204 365 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 GPR171O14626 319 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SMPD2O60906 423 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SNAPC5O75971 98 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 MFN2O95140 757 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 BCHEP06276 602 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 HEXAP06865 529 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ITGA5P08648 1049 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ETFAP13804 333 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 GADD45AP24522 165 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 EPHA2P29317 976 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 C21orf33P30042 268 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 SLC1A3P43003 542 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 CRATP43155 626 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 RORCP51449 518 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 POLR2HP52434 150 aaKnown RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 CRISP3P54108 245 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 BDH1Q02338 343 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 RUNX1T1Q06455 604 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 PIGFQ07326 219 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ASAH1Q13510 395 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 TPBGQ13641 420 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SLC17A1Q14916 467 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SPHARQ15513 63 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 GPAT3Q53EU6 434 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ENTPD8Q5MY95 495 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 FBXW9Q5XUX1 488 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ANKRD34AQ69YU3 496 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 C11orf71Q6IPW1 123 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 CD200R1LQ6Q8B3 271 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 CASP12Q6UXS9 341 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 BHLHA15Q7RTS1 189 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 ATG4DQ86TL0 474 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 C17orf78Q8N4C9 275 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 NANOGP1Q8N7R0 232 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 BBS10Q8TAM1 723 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 SLC38A5Q8WUX1 472 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 KISS1RQ969F8 398 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 SLC25A46Q96AG3 418 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ZC3HAV1LQ96H79 300 aaKnown RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 TMEM19Q96HH6 336 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 TPD52L3Q96J77 140 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 NUAK2Q9H093 628 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 MTHFD2LQ9H903 347 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 UBTD1Q9HAC8 227 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 C12orf10Q9HB07 376 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 INIPQ9NRY2 104 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 TAS2R16Q9NYV7 291 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 RABL2AQ9UBK7 228 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 REV1Q9UBZ9 1251 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 RABL2BQ9UNT1 228 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 ZNF443Q9Y2A4 671 aaPredicted RBP6.05□□□□□ -1.44
SPG11-224ENST00000561268 SLC25A15Q9Y619 301 aa6.05□□□□□ -1.44
SPG11-224ENST00000561268 A0A096LNT2 108 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 TMED7-TICAM2A0A0A6YYA0 188 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ARPC4-TTLL3A0A0A6YYG9 625 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 A0A0G2JPF8 293 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ANKRD61A6NGH8 418 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 LIPT2A6NK58 231 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 AQP7P3A6NL99 342 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 HNRNPCL2B2RXH8 293 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 HNRNPCL3B7ZW38 293 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 C5orf58C9J3I9 102 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ARHGEF9O43307 516 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 EIF1BO60739 113 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 LYZL6O75951 148 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 PTHP01270 115 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 H1F0P07305 194 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 HNRNPCL4P0DMR1 293 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 NR2F1P10589 423 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 CPEP16870 476 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 IL32P24001 234 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 TACR3P29371 465 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 IFNA8P32881 189 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 DDOSTP39656 456 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 IDH2P48735 452 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 SLC9A3P48764 834 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 CDH12P55289 794 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms