RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 EDARQ9UNE0 448 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 COA3Q9Y2R0 106 aaPredicted RBP12.01□□□□□ -0.49
TPM1-230ENST00000561266 CDH10Q9Y6N8 788 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 LOC100509620A0A075B734 347 aa12□□□□□ -0.49
TPM1-230ENST00000561266 IGLV1-36A0A0B4J1U3 117 aa12□□□□□ -0.49
TPM1-230ENST00000561266 OR6C68A6NDL8 312 aa12□□□□□ -0.49
TPM1-230ENST00000561266 FAM171A2A8MVW0 826 aa12□□□□□ -0.49
TPM1-230ENST00000561266 XKRYO14609 159 aa12□□□□□ -0.49
TPM1-230ENST00000561266 STAMBPO95630 424 aa12□□□□□ -0.49
TPM1-230ENST00000561266 RAB36O95755 333 aa12□□□□□ -0.49
TPM1-230ENST00000561266 IGHV4-39P01824 125 aa12□□□□□ -0.49
TPM1-230ENST00000561266 SERPINA5P05154 406 aa12□□□□□ -0.49
TPM1-230ENST00000561266 APEHP13798 732 aaKnown RBP12□□□□□ -0.49
TPM1-230ENST00000561266 NR4A1P22736 598 aa12□□□□□ -0.49
TPM1-230ENST00000561266 APEX1P27695 318 aaKnown RBP12□□□□□ -0.49
TPM1-230ENST00000561266 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
TPM1-230ENST00000561266 IFNGR2P38484 337 aa12□□□□□ -0.49
TPM1-230ENST00000561266 RASSF2P50749 326 aa12□□□□□ -0.49
TPM1-230ENST00000561266 RPS6KA3P51812 740 aa12□□□□□ -0.49
TPM1-230ENST00000561266 NRN1LQ496H8 165 aa12□□□□□ -0.49
TPM1-230ENST00000561266 PABPC1L2AQ5JQF8 200 aa12□□□□□ -0.49
TPM1-230ENST00000561266 Q5PR19 223 aa12□□□□□ -0.49
TPM1-230ENST00000561266 LEG1Q6P5S2 330 aa12□□□□□ -0.49
TPM1-230ENST00000561266 TGIF2LYQ8IUE0 185 aa12□□□□□ -0.49
TPM1-230ENST00000561266 OR6V1Q8N148 313 aa12□□□□□ -0.49
TPM1-230ENST00000561266 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
TPM1-230ENST00000561266 DEPDC4Q8N2C3 294 aa12□□□□□ -0.49
TPM1-230ENST00000561266 NPEPL1Q8NDH3 523 aa12□□□□□ -0.49
TPM1-230ENST00000561266 SDR9C7Q8NEX9 313 aa12□□□□□ -0.49
TPM1-230ENST00000561266 GIPC3Q8TF64 312 aa12□□□□□ -0.49
TPM1-230ENST00000561266 NANOS1Q8WY41 292 aaKnown RBP12□□□□□ -0.49
TPM1-230ENST00000561266 CACNG6Q9BXT2 260 aa12□□□□□ -0.49
TPM1-230ENST00000561266 RERGLQ9H628 205 aa12□□□□□ -0.49
TPM1-230ENST00000561266 RNF121Q9H920 327 aa12□□□□□ -0.49
TPM1-230ENST00000561266 SRA1Q9HD15 236 aaKnown RBP12□□□□□ -0.49
TPM1-230ENST00000561266 CBLN4Q9NTU7 201 aa12□□□□□ -0.49
TPM1-230ENST00000561266 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
TPM1-230ENST00000561266 AHCYL1O43865 530 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 FARS2O95363 451 aaKnown RBP11.99□□□□□ -0.49
TPM1-230ENST00000561266 PSKH1P11801 424 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 NPR2P20594 1047 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 PAX7P23759 505 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 ERVS71-1P61550 626 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 SNTB2Q13425 540 aaKnown RBP11.99□□□□□ -0.49
TPM1-230ENST00000561266 MEP1BQ16820 701 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 SLC36A2Q495M3 483 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 AGAP6Q5VW22 663 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 ZNF544Q6NX49 715 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 LRP11Q86VZ4 500 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 FBXL14Q8N1E6 418 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 CIARTQ8N365 385 aaPredicted RBP11.99□□□□□ -0.49
TPM1-230ENST00000561266 LINC00471Q8N535 108 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 IQCF1Q8N6M8 205 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 NUP37Q8NFH4 326 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 OR52E2Q8NGJ4 325 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 C11orf40Q8WZ69 217 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 POP5Q969H6 163 aaKnown RBP11.99□□□□□ -0.49
TPM1-230ENST00000561266 KCNS3Q9BQ31 491 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 TSSK6Q9BXA6 273 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 GRIP2Q9C0E4 1043 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 DNAJB9Q9UBS3 223 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 B9D1Q9UPM9 204 aa11.99□□□□□ -0.49
TPM1-230ENST00000561266 CR1P17927 2039 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 GNGT2O14610 69 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 KHDRBS3O75525 346 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 LY6HO94772 140 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 CST2P09228 141 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 OR4A8P0C604 315 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 GAAP10253 952 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 MSR1P21757 451 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 ATP5J2P56134 94 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.98□□□□□ -0.49
TPM1-230ENST00000561266 DAG1Q14118 895 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 TMEM255AQ5JRV8 349 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 C1orf146Q5VVC0 180 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 TMEM53Q6P2H8 277 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 LYPD4Q6UWN0 246 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 YTHDF3Q7Z739 585 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 AMIGO2Q86SJ2 522 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 ADCK1Q86TW2 530 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 SLC30A7Q8NEW0 376 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 OR4F15Q8NGB8 312 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 FNDC8Q8TC99 324 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 DUS3LQ96G46 650 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 OR51B6Q9H340 312 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 MMADHCQ9H3L0 296 aaPredicted RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 CXorf56Q9H5V9 222 aa11.98□□□□□ -0.49
TPM1-230ENST00000561266 RPRD1BQ9NQG5 326 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 MYEF2Q9P2K5 600 aaKnown RBP11.98□□□□□ -0.49
TPM1-230ENST00000561266 FZR1Q9UM11 496 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms