RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SPRNQ5BIV9 151 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 XKR7Q5GH72 579 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 TNFAIP8L3Q5GJ75 292 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 MRPL2Q5T653 305 aaKnown RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 MBNL2Q5VZF2 373 aaKnown RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 SLC16A14Q7RTX9 510 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 RNF144BQ7Z419 303 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 NDUFA11Q86Y39 141 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 TMEM151AQ8N4L1 468 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 OR2Z1Q8NG97 314 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 OR5R1Q8NH85 324 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 ZNF417Q8TAU3 575 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 SLC25A40Q8TBP6 338 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 KLF14Q8TD94 323 aaPredicted RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 CLPTM1LQ96KA5 538 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 SIGLEC11Q96RL6 698 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 ZNF587Q96SQ5 575 aaPredicted RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 GSTO2Q9H4Y5 243 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 GAR1Q9NY12 217 aaKnown RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 NKX1-2Q9UD57 310 aaPredicted RBP7.91□□□□□ -1.14
HERC1-210ENST00000560897 PRDM4Q9UKN5 801 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 SIGLEC9Q9Y336 463 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 CCL27Q9Y4X3 112 aa7.91□□□□□ -1.14
HERC1-210ENST00000560897 hCG_2014768A0A024R1R8 64 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 FTCDNL1E5RQL4 147 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 TMEM178BH3BS89 294 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 NPHS1O60500 1241 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 SERPINE1P05121 402 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 LIPFP07098 398 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 GKN3PP0CG01 181 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 EFNB2P52799 333 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 GUCA2AQ02747 115 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 SMU1Q2TAY7 513 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 RFTN2Q52LD8 501 aaPredicted RBP7.9□□□□□ -1.14
HERC1-210ENST00000560897 CD276Q5ZPR3 534 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 H1FNTQ75WM6 255 aaPredicted RBP7.9□□□□□ -1.14
HERC1-210ENST00000560897 VRK2Q86Y07 508 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 CLEC4FQ8N1N0 589 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 DTX3Q8N9I9 347 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 FGFBP3Q8TAT2 258 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 ITLN1Q8WWA0 313 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 SH3GL3Q99963 347 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 DUSP26Q9BV47 211 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 CDADC1Q9BWV3 514 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 OR2J1Q9GZK6 312 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 CNTD2Q9H8S5 307 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 EMCNQ9ULC0 261 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 FIS1Q9Y3D6 152 aa7.9□□□□□ -1.14
HERC1-210ENST00000560897 LYSTQ99698 3801 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 LRRC30A6NM36 301 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 H3BSA7 217 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 NPIPB7O75200 414 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 LYPLA1O75608 230 aaPredicted RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 SERPINI2O75830 405 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ZNF205O95201 554 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 DUS4LO95620 317 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 PAHP00439 452 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 DBIP07108 87 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 PF4V1P10720 104 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 LYL1P12980 280 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 BGNP21810 368 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 LMO1P25800 156 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 GRPRP30550 384 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ARRB2P32121 409 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 SLC1A6P48664 564 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 MMP16P51512 607 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ARHGDIAP52565 204 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ABCE1P61221 599 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 FUT5Q11128 374 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 PCLAFQ15004 111 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 FAM69AQ5T7M9 428 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 WDR25Q64LD2 544 aaPredicted RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 C5orf46Q6UWT4 87 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 PDZD9Q8IXQ8 264 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 PEX5LQ8IYB4 626 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 PNLDC1Q8NA58 520 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 Q8NFD4 153 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ABHD4Q8TB40 342 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 MIPOL1Q8TD10 442 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 SLC38A4Q969I6 547 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 WDFY2Q96P53 400 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 TECTBQ96PL2 329 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 TMEM246Q9BRR3 403 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 PTDSS2Q9BVG9 487 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 GPR61Q9BZJ8 451 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 KCNN2Q9H2S1 579 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 CACYBPQ9HB71 228 aaKnown RBP7.89□□□□□ -1.15
HERC1-210ENST00000560897 THAP1Q9NVV9 213 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 ZNRD1Q9P1U0 126 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 IL19Q9UHD0 177 aa7.89□□□□□ -1.15
HERC1-210ENST00000560897 LOC102725191A0A1B0GVB3 256 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 C5orf49A4QMS7 147 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 C22orf46C9J442 243 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 AZIN1O14977 448 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 LSM1O15116 133 aaKnown RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 POLR3GO15318 223 aaPredicted RBP7.88□□□□□ -1.15
HERC1-210ENST00000560897 PEX14O75381 377 aa7.88□□□□□ -1.15
HERC1-210ENST00000560897 PF4P02776 101 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms