RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SLC5A6Q9Y289 635 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 DUSP8Q13202 625 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SAXO2Q658L1 398 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 IDO2Q6ZQW0 420 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 OR7G2Q8NG99 324 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 GABARAPH6UMI1 98 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 HS3ST1O14792 307 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 GABARAPO95166 117 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 RBMS2Q15434 407 aaKnown RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 FUNDC1Q8IVP5 155 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TMEM185AQ8NFB2 350 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 MYEOVQ96EZ4 313 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 KCNJ16Q9NPI9 418 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ICOSLGO75144 302 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TEKQ02763 1124 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ANGPTL5Q86XS5 388 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 LRFN5Q96NI6 719 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 POMT2Q9UKY4 750 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TP53BP1Q12888 1972 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 A0A087WV62 115 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SLC16A6O15403 523 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SELENOFO60613 162 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TNFSF8P32971 234 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 EMP3P54852 163 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF546Q86UE3 836 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 RPP25Q9BUL9 199 aaKnown RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 HMGN4O00479 90 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 HACD4Q5VWC8 232 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 CLEC1BQ9P126 229 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 R4GN57 208 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SRMP19623 302 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 TGM4P49221 684 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 EIF3IQ13347 325 aaKnown RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 GALEQ14376 348 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 IL11RAQ14626 422 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 NMNAT2Q9BZQ4 307 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 TUBB1Q9H4B7 451 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 ASH2LQ9UBL3 628 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 LTBP4Q8N2S1 1624 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 C5orf49A4QMS7 147 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 F8W036 122 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 LGALS8O00214 317 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SLC6A12P48065 614 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 HBG1P69891 147 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 HBG2P69892 147 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 BLOC1S1P78537 153 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 PLPP7Q8NBV4 271 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 IER2Q9BTL4 223 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 ZMAT3Q9HA38 289 aaKnown RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 C19orf12Q9NSK7 152 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 TNFSF11O14788 317 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 AGPAT2O15120 278 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 GUSBP08236 651 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 ALDH3B1P43353 468 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 HEPHL1Q6MZM0 1159 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 PTRH1Q86Y79 214 aaKnown RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 OR14A2Q96R54 314 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 PLCXD1Q9NUJ7 323 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 A0A1W2PS29 197 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SLC22A23A1A5C7 686 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 NFYAP23511 347 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-208ENST00000560371 FXNQ16595 210 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SYT9Q86SS6 491 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 TXN2Q99757 166 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 LAT2Q9GZY6 243 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 A0A096LPE4 126 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 A0A1W2PPZ6 126 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 MMP11P24347 488 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SHC1P29353 583 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 TAS2R30P59541 319 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 NKAIN4Q8IVV8 208 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 KLHDC8BQ8IXV7 354 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SLAMF9Q96A28 289 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
TRAF3-208ENST00000560371 SCG5P05408 212 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CA13Q8N1Q1 262 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 KIRREL1Q96J84 757 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 PRRX2Q99811 253 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 PSORS1C1Q9UIG5 152 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms